Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : OG2    

Bonds between two atoms of the molecule

Total Number of Bonds: 41


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C12 C11 C C sing 1.53 N N
2 C11 N2 C N sing 1.46 N N
3 N2 C N C sing 1.37 N N
4 C N1 C N sing 1.37 N N
5 C N C N doub 1.3 N N
6 N1 C1 N C sing 1.46 N N
7 C1 C9 C C sing 1.53 N N
8 C1 C2 C C sing 1.53 N N
9 C1 C6 C C sing 1.53 N N
10 C9 C8 C C sing 1.53 N N
11 C2 C3 C C sing 1.53 N N
12 C6 C5 C C sing 1.53 N N
13 C8 C10 C C sing 1.53 N N
14 C8 C7 C C sing 1.53 N N
15 C3 C10 C C sing 1.53 N N
16 C3 C4 C C sing 1.53 N N
17 C5 C7 C C sing 1.53 N N
18 C5 C4 C C sing 1.53 N N
19 N1 H1 N H sing 0.97 N N
20 C2 H2 C H sing 1.09 N N
21 C2 H3 C H sing 1.09 N N
22 N2 H4 N H sing 0.97 N N
23 C3 H5 C H sing 1.09 N N
24 C4 H6 C H sing 1.09 N N
25 C4 H7 C H sing 1.09 N N
26 C5 H8 C H sing 1.09 N N
27 C6 H9 C H sing 1.09 N N
28 C6 H10 C H sing 1.09 N N
29 C7 H11 C H sing 1.09 N N
30 C7 H12 C H sing 1.09 N N
31 C8 H13 C H sing 1.09 N N
32 C9 H14 C H sing 1.09 N N
33 C9 H15 C H sing 1.09 N N
34 C10 H16 C H sing 1.09 N N
35 C10 H17 C H sing 1.09 N N
36 N H18 N H sing 0.97 N N
37 C11 H19 C H sing 1.09 N N
38 C11 H20 C H sing 1.09 N N
39 C12 H21 C H sing 1.09 N N
40 C12 H22 C H sing 1.09 N N
41 C12 H23 C H sing 1.09 N N