Services
Research
Training
Industry
About us
Protein Data Bank
in Europe
Bringing Structure to Biology
Chemical Components in the PDB
pdbe.org/chem
Feedback
Share
Summary
Atoms
Bonds
In PDB Entries
Names
Descriptors
Complete Listing
Modify Search
Download Links
Molfile:
Ideal
Representative
PDB:
Ideal
Representative
Other:
mmCif
CML
Related compounds
Could not find any related compound in the PDB.
3D-Views
Ideal
Representative
PDB Links
PDB entries
PDBeChem : Chemical Bonds
Molecule :
OG2
Bonds between two atoms of the molecule
Total Number of Bonds: 41
50
10 per page
20 per page
Show all
Record
First Atom
Second Atom
First Element
Second Element
Bond Order Type
Bond Length
Bond Stereochemistry
Is Aromatic
1
C12
C11
C
C
sing
1.53
N
N
2
C11
N2
C
N
sing
1.46
N
N
3
N2
C
N
C
sing
1.37
N
N
4
C
N1
C
N
sing
1.37
N
N
5
C
N
C
N
doub
1.3
N
N
6
N1
C1
N
C
sing
1.46
N
N
7
C1
C9
C
C
sing
1.53
N
N
8
C1
C2
C
C
sing
1.53
N
N
9
C1
C6
C
C
sing
1.53
N
N
10
C9
C8
C
C
sing
1.53
N
N
11
C2
C3
C
C
sing
1.53
N
N
12
C6
C5
C
C
sing
1.53
N
N
13
C8
C10
C
C
sing
1.53
N
N
14
C8
C7
C
C
sing
1.53
N
N
15
C3
C10
C
C
sing
1.53
N
N
16
C3
C4
C
C
sing
1.53
N
N
17
C5
C7
C
C
sing
1.53
N
N
18
C5
C4
C
C
sing
1.53
N
N
19
N1
H1
N
H
sing
0.97
N
N
20
C2
H2
C
H
sing
1.09
N
N
21
C2
H3
C
H
sing
1.09
N
N
22
N2
H4
N
H
sing
0.97
N
N
23
C3
H5
C
H
sing
1.09
N
N
24
C4
H6
C
H
sing
1.09
N
N
25
C4
H7
C
H
sing
1.09
N
N
26
C5
H8
C
H
sing
1.09
N
N
27
C6
H9
C
H
sing
1.09
N
N
28
C6
H10
C
H
sing
1.09
N
N
29
C7
H11
C
H
sing
1.09
N
N
30
C7
H12
C
H
sing
1.09
N
N
31
C8
H13
C
H
sing
1.09
N
N
32
C9
H14
C
H
sing
1.09
N
N
33
C9
H15
C
H
sing
1.09
N
N
34
C10
H16
C
H
sing
1.09
N
N
35
C10
H17
C
H
sing
1.09
N
N
36
N
H18
N
H
sing
0.97
N
N
37
C11
H19
C
H
sing
1.09
N
N
38
C11
H20
C
H
sing
1.09
N
N
39
C12
H21
C
H
sing
1.09
N
N
40
C12
H22
C
H
sing
1.09
N
N
41
C12
H23
C
H
sing
1.09
N
N