Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : OLD    

Bonds between two atoms of the molecule

Total Number of Bonds: 36


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 CA N C N sing 1.47 N N
2 N HN N H sing 1.01 N N
3 N HNA N H sing 1.01 N N
4 CB CA C C sing 1.53 N N
5 CA C C C sing 1.51 N N
6 CA HA C H sing 1.09 N N
7 CG CB C C sing 1.51 N N
8 CB HB C H sing 1.09 N N
9 CB HBA C H sing 1.09 N N
10 CD2 CG C C doub 1.35 N Y
11 CG ND1 C N sing 1.37 N Y
12 NE2 CD2 N C sing 1.34 N Y
13 CD2 HD2 C H sing 1.08 N N
14 CE1 ND1 C N sing 1.35 N Y
15 ND1 CH N C sing 1.47 N N
16 NE2 CE1 N C doub 1.3 N Y
17 CE1 HE1 C H sing 1.08 N N
18 C9 CH C C sing 1.51 N N
19 CH HH C H sing 1.09 N N
20 CH HHA C H sing 1.09 N N
21 CD1 CG1 C C doub 1.4 N Y
22 CG1 CD3 C C sing 1.4 N Y
23 CG1 C9 C C sing 1.47 N N
24 CE3 CD1 C C sing 1.38 N Y
25 CD1 HD1 C H sing 1.08 N N
26 CE3 CZ C C doub 1.39 N Y
27 CE3 HE3 C H sing 1.08 N N
28 CE2 CD3 C C doub 1.38 N Y
29 CD3 HD3 C H sing 1.08 N N
30 CZ CE2 C C sing 1.39 N Y
31 CE2 HE2 C H sing 1.08 N N
32 CZ BR C BR sing 1.89 N N
33 O2 C9 O C doub 1.21 N N
34 O C O C doub 1.21 N N
35 C OXT C O sing 1.34 N N
36 OXT HOXT O H sing 0.97 N N