Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : RD6    

Bonds between two atoms of the molecule

Total Number of Bonds: 46


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C24 C23 C C sing 1.54 N N
2 C24 C21 C C sing 1.52 N N
3 C18 N19 C N doub 1.32 N Y
4 C18 N17 C N sing 1.32 N Y
5 N19 C06 N C sing 1.33 N Y
6 C20 C21 C C sing 1.54 N N
7 C20 N05 C N sing 1.49 N N
8 C23 C22 C C sing 1.54 N N
9 C21 C22 C C sing 1.52 N N
10 C21 C03 C C sing 1.53 N N
11 N17 C16 N C doub 1.33 N Y
12 F25 C03 F C sing 1.4 N N
13 C06 N05 C N sing 1.38 N N
14 C06 C07 C C doub 1.4 N Y
15 N05 C04 N C sing 1.48 N N
16 C03 C04 C C sing 1.54 N N
17 C03 C02 C C sing 1.51 N N
18 C16 C07 C C sing 1.4 N Y
19 C16 N15 C N sing 1.37 N Y
20 C07 C08 C C sing 1.47 N Y
21 O01 C02 O C doub 1.21 N N
22 C02 O26 C O sing 1.34 N N
23 N15 C09 N C sing 1.38 N Y
24 C08 C09 C C doub 1.4 N Y
25 C08 C13 C C sing 1.39 N Y
26 C09 C10 C C sing 1.39 N Y
27 C13 C12 C C doub 1.38 N Y
28 C10 C11 C C doub 1.38 N Y
29 C12 C11 C C sing 1.39 N Y
30 C11 BR14 C BR sing 1.89 N N
31 C04 H041 C H sing 1.09 N N
32 C04 H042 C H sing 1.09 N N
33 C10 H101 C H sing 1.08 N N
34 C12 H121 C H sing 1.08 N N
35 C13 H131 C H sing 1.08 N N
36 C18 H181 C H sing 1.08 N N
37 C20 H201 C H sing 1.09 N N
38 C20 H202 C H sing 1.09 N N
39 C22 H221 C H sing 1.09 N N
40 C22 H222 C H sing 1.09 N N
41 C23 H231 C H sing 1.09 N N
42 C23 H232 C H sing 1.09 N N
43 C24 H242 C H sing 1.09 N N
44 C24 H241 C H sing 1.09 N N
45 N15 H151 N H sing 0.97 N N
46 O26 H1 O H sing 0.97 N N