Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : RYA    

Bonds between two atoms of the molecule

Total Number of Bonds: 43


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 F2 C11 F C sing 1.35 N N
2 N4 C6 N C doub 1.33 N Y
3 N4 C5 N C sing 1.32 N Y
4 C10 C11 C C doub 1.38 N Y
5 C10 C9 C C sing 1.39 N Y
6 N5 C5 N C sing 1.39 N N
7 N5 C9 N C sing 1.4 N N
8 C6 C4 C C sing 1.38 N Y
9 C11 C12 C C sing 1.39 N Y
10 C5 N3 C N doub 1.33 N Y
11 C9 C14 C C doub 1.39 N Y
12 C7 N2 C N sing 1.46 N N
13 C4 N2 C N sing 1.4 N N
14 C4 C3 C C doub 1.4 N Y
15 C12 O2 C O sing 1.36 N N
16 C12 C13 C C doub 1.39 N Y
17 N3 C3 N C sing 1.33 N Y
18 C14 C13 C C sing 1.38 N Y
19 N2 C1 N C sing 1.35 N N
20 C3 N1 C N sing 1.38 N N
21 C13 F1 C F sing 1.35 N N
22 C1 O1 C O doub 1.21 N N
23 C1 C2 C C sing 1.51 N N
24 N1 C2 N C sing 1.47 N N
25 N1 C8 N C sing 1.47 N N
26 C2 C17 C C sing 1.53 N N
27 C8 C15 C C sing 1.47 N N
28 C15 C16 C C trip 1.17 N N
29 C14 H1 C H sing 1.08 N N
30 C6 H2 C H sing 1.08 N N
31 C7 H3 C H sing 1.09 N N
32 C7 H4 C H sing 1.09 N N
33 C7 H5 C H sing 1.09 N N
34 C8 H6 C H sing 1.09 N N
35 C8 H7 C H sing 1.09 N N
36 C10 H8 C H sing 1.08 N N
37 C2 H9 C H sing 1.09 N N
38 N5 H10 N H sing 0.97 N N
39 O2 H11 O H sing 0.97 N N
40 C16 H12 C H sing 1.05 N N
41 C17 H13 C H sing 1.09 N N
42 C17 H14 C H sing 1.09 N N
43 C17 H15 C H sing 1.09 N N