Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : T9H    

Bonds between two atoms of the molecule

Total Number of Bonds: 78


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O4 C6 O C doub 1.21 N N
2 C6 N2 C N sing 1.35 N N
3 C6 C7 C C sing 1.51 N N
4 N2 C5 N C sing 1.4 N N
5 C5 C4 C C doub 1.39 N Y
6 C5 C1 C C sing 1.39 N Y
7 C4 C3 C C sing 1.38 N Y
8 C3 N1 C N doub 1.32 N Y
9 N1 C2 N C sing 1.32 N Y
10 C2 C1 C C doub 1.38 N Y
11 C7 C23 C C sing 1.53 N N
12 C7 N3 C N sing 1.46 N N
13 C23 C24 C C sing 1.51 N N
14 C24 C27 C C sing 1.46 N Y
15 C24 C25 C C doub 1.34 N Y
16 C27 C28 C C sing 1.4 N Y
17 C27 C26 C C doub 1.41 N Y
18 C28 C29 C C doub 1.37 N Y
19 C29 C30 C C sing 1.39 N Y
20 C30 C31 C C doub 1.38 N Y
21 C31 C26 C C sing 1.39 N Y
22 C26 N6 C N sing 1.38 N Y
23 N6 C25 N C sing 1.37 N Y
24 N3 C8 N C sing 1.35 N N
25 C8 O3 C O doub 1.22 N N
26 C8 C9 C C sing 1.47 N N
27 C9 C22 C C sing 1.4 N Y
28 C9 C10 C C doub 1.4 N Y
29 C22 F C F sing 1.35 N N
30 C22 C21 C C doub 1.38 N Y
31 C21 C12 C C sing 1.39 N Y
32 C12 C11 C C doub 1.39 N Y
33 C12 N4 C N sing 1.39 N N
34 C11 C10 C C sing 1.36 N Y
35 N4 C20 N C sing 1.47 N N
36 N4 C13 N C sing 1.47 N N
37 C20 C19 C C sing 1.53 N N
38 C19 N5 C N sing 1.47 N N
39 N5 C14 N C sing 1.47 N N
40 N5 S1 N S sing 1.66 N N
41 C14 C13 C C sing 1.53 N N
42 S1 O1 S O doub 1.42 N N
43 S1 O2 S O doub 1.42 N N
44 S1 C15 S C sing 1.76 N N
45 C15 S2 C S sing 1.76 N Y
46 C15 C16 C C doub 1.33 N Y
47 S2 C18 S C sing 1.76 N Y
48 C18 C17 C C doub 1.33 N Y
49 C17 C16 C C sing 1.38 N Y
50 N2 H2 N H sing 0.97 N N
51 C7 H7 C H sing 1.09 N N
52 C4 H4 C H sing 1.08 N N
53 C1 H1 C H sing 1.08 N N
54 C3 H3 C H sing 1.08 N N
55 C2 HA C H sing 1.08 N N
56 C23 H231 C H sing 1.09 N N
57 C23 H232 C H sing 1.09 N N
58 N3 HB N H sing 0.97 N N
59 C25 H25 C H sing 1.08 N N
60 C28 H28 C H sing 1.08 N N
61 C29 H29 C H sing 1.08 N N
62 C30 H30 C H sing 1.08 N N
63 C31 H31 C H sing 1.08 N N
64 N6 H6 N H sing 0.97 N N
65 C10 H10 C H sing 1.08 N N
66 C21 H21 C H sing 1.08 N N
67 C11 H11 C H sing 1.08 N N
68 C20 H201 C H sing 1.09 N N
69 C20 H202 C H sing 1.09 N N
70 C13 H131 C H sing 1.09 N N
71 C13 H132 C H sing 1.09 N N
72 C19 H191 C H sing 1.09 N N
73 C19 H192 C H sing 1.09 N N
74 C14 H141 C H sing 1.09 N N
75 C14 H142 C H sing 1.09 N N
76 C16 H16 C H sing 1.08 N N
77 C18 H18 C H sing 1.08 N N
78 C17 H17 C H sing 1.08 N N