Chemical Components in the PDB

pdbe.org/chem
wwPDB
EMDataBank
spacer

PDBeChem : Chemical Bonds

 Molecule : VKW    

Bonds between two atoms of the molecule

Total Number of Bonds: 56


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O C13 O C doub 1.22 N N
2 N4 C13 N C sing 1.35 N N
3 N4 C12 N C sing 1.36 N N
4 C13 C14 C C sing 1.47 N N
5 C11 C12 C C sing 1.51 N N
6 C11 C10 C C sing 1.53 N N
7 C12 N5 C N doub 1.3 N N
8 C14 C15 C C doub 1.39 N Y
9 C14 C19 C C sing 1.41 N Y
10 C10 C9 C C sing 1.53 N N
11 C9 N3 C N sing 1.47 N N
12 C15 C16 C C sing 1.38 N Y
13 C7 N3 C N sing 1.47 N N
14 C7 C8 C C sing 1.53 N N
15 N3 C6 N C sing 1.47 N N
16 N5 C19 N C sing 1.36 N N
17 C8 N2 C N sing 1.47 N N
18 C19 C18 C C doub 1.4 N Y
19 C16 C17 C C doub 1.39 N Y
20 C18 C17 C C sing 1.38 N Y
21 C18 CL C CL sing 1.74 N N
22 N C3 N C doub 1.31 N Y
23 N C2 N C sing 1.34 N Y
24 C6 C5 C C sing 1.53 N N
25 N2 C5 N C sing 1.47 N N
26 N2 C3 N C sing 1.38 N N
27 C3 N1 C N sing 1.36 N Y
28 C2 C1 C C doub 1.34 N Y
29 N1 C1 N C sing 1.38 N Y
30 N1 C4 N C sing 1.46 N N
31 C1 C C C sing 1.51 N N
32 C2 H1 C H sing 1.08 N N
33 C7 H2 C H sing 1.09 N N
34 C7 H3 C H sing 1.09 N N
35 C8 H4 C H sing 1.09 N N
36 C8 H5 C H sing 1.09 N N
37 C9 H6 C H sing 1.09 N N
38 C9 H7 C H sing 1.09 N N
39 C10 H8 C H sing 1.09 N N
40 C10 H9 C H sing 1.09 N N
41 C11 H10 C H sing 1.09 N N
42 C11 H11 C H sing 1.09 N N
43 C15 H12 C H sing 1.08 N N
44 C16 H13 C H sing 1.08 N N
45 C17 H14 C H sing 1.08 N N
46 N4 H15 N H sing 0.97 N N
47 C6 H17 C H sing 1.09 N N
48 C6 H18 C H sing 1.09 N N
49 C5 H19 C H sing 1.09 N N
50 C5 H20 C H sing 1.09 N N
51 C4 H21 C H sing 1.09 N N
52 C4 H22 C H sing 1.09 N N
53 C4 H23 C H sing 1.09 N N
54 C H24 C H sing 1.09 N N
55 C H25 C H sing 1.09 N N
56 C H26 C H sing 1.09 N N