Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : VVN    

Bonds between two atoms of the molecule

Total Number of Bonds: 50


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C9 C8 C C doub 1.38 N Y
2 C9 C10 C C sing 1.38 N Y
3 C8 C7 C C sing 1.39 N Y
4 C10 C11 C C doub 1.38 N Y
5 C7 O2 C O sing 1.36 N N
6 C7 C12 C C doub 1.39 N Y
7 C4 C3 C C sing 1.53 N N
8 C6 O2 C O sing 1.43 N N
9 C6 C5 C C sing 1.53 N N
10 C11 C12 C C sing 1.39 N Y
11 C12 O3 C O sing 1.36 N N
12 C3 C2 C C sing 1.51 N N
13 C5 N1 C N sing 1.46 N N
14 C2 N1 C N sing 1.35 N N
15 C2 O1 C O doub 1.21 N N
16 O3 C13 O C sing 1.36 N N
17 N1 C1 N C sing 1.47 N N
18 C14 C13 C C doub 1.36 N Y
19 C14 C15 C C sing 1.41 N Y
20 C13 C17 C C sing 1.42 N Y
21 C15 C16 C C doub 1.35 N Y
22 C17 C18 C C doub 1.38 N Y
23 C17 N2 C N sing 1.38 N Y
24 C16 N2 C N sing 1.38 N Y
25 C18 C19 C C sing 1.41 N Y
26 N2 C21 N C sing 1.36 N Y
27 C21 C19 C C doub 1.38 N Y
28 C19 C20 C C sing 1.43 N N
29 C20 N3 C N trip 1.14 N N
30 C4 H6 C H sing 1.09 N N
31 C4 H5 C H sing 1.09 N N
32 C4 H20 C H sing 1.09 N N
33 C5 H7 C H sing 1.09 N N
34 C5 H8 C H sing 1.09 N N
35 C6 H10 C H sing 1.09 N N
36 C6 H9 C H sing 1.09 N N
37 C8 H11 C H sing 1.08 N N
38 C9 H12 C H sing 1.08 N N
39 C10 H13 C H sing 1.08 N N
40 C11 H14 C H sing 1.08 N N
41 C1 H2 C H sing 1.09 N N
42 C1 H1 C H sing 1.09 N N
43 C1 H3 C H sing 1.09 N N
44 C14 H15 C H sing 1.08 N N
45 C15 H16 C H sing 1.08 N N
46 C16 H17 C H sing 1.08 N N
47 C18 H18 C H sing 1.08 N N
48 C21 H19 C H sing 1.08 N N
49 C3 H21 C H sing 1.09 N N
50 C3 H4 C H sing 1.09 N N