Chemical Components in the PDB

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PDBeChem : Chemical Bonds

 Molecule : ZIM    

Bonds between two atoms of the molecule

Total Number of Bonds: 41


Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 C1 C2 C C doub 1.38 N Y
2 C2 C3 C C sing 1.38 N Y
3 C3 C4 C C doub 1.38 N Y
4 C4 C5 C C sing 1.38 N Y
5 C5 C6 C C doub 1.39 N Y
6 C6 N1 C N sing 1.4 N N
7 N1 C7 N C sing 1.35 N N
8 C7 O1 C O doub 1.22 N N
9 C7 N2 C N sing 1.35 N N
10 N2 C8 N C sing 1.47 N N
11 C8 C9 C C sing 1.53 N N
12 C9 N3 C N sing 1.47 N N
13 N3 C10 N C sing 1.47 N N
14 C10 C11 C C sing 1.53 N N
15 N3 C12 N C sing 1.35 N N
16 C12 O2 C O doub 1.22 N N
17 C12 C13 C C sing 1.47 N N
18 C13 C14 C C doub 1.37 N Y
19 C14 C15 C C sing 1.4 N Y
20 C15 C16 C C doub 1.35 N Y
21 C16 O3 C O sing 1.34 N Y
22 C1 C6 C C sing 1.39 N Y
23 N2 C11 N C sing 1.47 N N
24 C13 O3 C O sing 1.35 N Y
25 N1 H5 N H sing 0.97 N N
26 C4 H3 C H sing 1.08 N N
27 C5 H4 C H sing 1.08 N N
28 C8 H6 C H sing 1.09 N N
29 C8 H7 C H sing 1.09 N N
30 C10 H10 C H sing 1.09 N N
31 C10 H11 C H sing 1.09 N N
32 C15 H15 C H sing 1.08 N N
33 C2 H1 C H sing 1.08 N N
34 C3 H2 C H sing 1.08 N N
35 C9 H9 C H sing 1.09 N N
36 C9 H8 C H sing 1.09 N N
37 C11 H13 C H sing 1.09 N N
38 C11 H12 C H sing 1.09 N N
39 C14 H14 C H sing 1.08 N N
40 C16 H16 C H sing 1.08 N N
41 C1 CL1 C CL sing 1.74 N N