Chemical Components in the PDB

pdbe.org/chem
spacer

NSM : Summary

Code

NSM

One-letter code

X

Molecule name

NITROSOMETHANE

Systematic names

ProgramVersionName
ACDLabs 10.04 nitrosomethane
OpenEye OEToolkits 1.5.0 nitrosomethane

Formula

C H3 N O

Formal charge

0

Molecular weight

45.041 Da

SMILES

TypeProgramVersionDescriptor
SMILES ACDLabs 10.04 O=NC
SMILES CACTVS 3.341 CN=O
SMILES OpenEye OEToolkits 1.5.0 CN=O
Canonical SMILES CACTVS 3.341 CN=O
Canonical SMILES OpenEye OEToolkits 1.5.0 CN=O

IUPAC InChI

InChI=1S/CH3NO/c1-2-3/h1H3

IUPAC InChI key

IMHRONYAKYWGCC-UHFFFAOYSA-N
NSM

wwPDB Information

Atom count

6 (3 without Hydrogen)

Polymer type

Bound ligand

Type description

NON-POLYMER

Type code

HETAIN

Is modified

No

Standard parent

Not Assigned

Defined at

2006-11-10

Last modified at

2011-06-04

Status

Released

Obsoleted

Not Assigned



NSM : Atoms of Molecule

Total Number of Atoms: 6
Record Atom Name Symbol PDB Name Stereochemistry Is Aromatic Is Leaving Atom Charge X-Coordinate Y-Coordinate Z-Coordinate
1 O1 O O1 N N N 0 -1.497 2.284 0.589
2 N N N N N N 0 -0.355 2.066 0.142
3 C1 C C1 N N N 0 0.238 0.839 0.659
4 H11 H 1H1 N N N 0 1.324 0.944 0.722
5 H12 H 2H1 N N N 0 0.0 0.0 0.0
6 H13 H 3H1 N N N 0 -0.155 0.627 1.657



NSM : Chemical Bonds

Total Number of Bonds: 5
Record First Atom Second Atom First Element Second Element Bond Order Type Bond Length Bond Stereochemistry Is Aromatic
1 O1 N O N doub 1.25 N N
2 N C1 N C sing 1.46 N N
3 C1 H11 C H sing 1.09 N N
4 C1 H12 C H sing 1.09 N N
5 C1 H13 C H sing 1.09 N N



NSM : Used in PDB Entries

Total Number of PDB Entries: 5
Ligand Code PDB Entry ID Type Total Distinct
NSM 2nsr Open in New Window Bound ligand 1 1
NSM 4m4a Open in New Window Bound ligand 2 1
NSM 6e02 Open in New Window Bound ligand 2 1
NSM 8f9h Open in New Window Bound ligand 1 1
NSM 8fdm Open in New Window Bound ligand 2 1