› 1bbt

X-ray diffraction
2.6Å resolution

METHODS USED IN THE STRUCTURE DETERMINATION OF FOOT AND MOUTH DISEASE VIRUS

Released:
DOI: 10.2210/pdb1bbt/pdb
PDB entry 1bbt coloured by chain, front view.
PDB entry 1bbt coloured by chain, side view.
PDB entry 1bbt coloured by chain, top view.
Source organism: Foot-and-mouth disease virus
Primary publication:
Methods used in the structure determination of foot-and-mouth disease virus.
Fry E, Acharya R, Stuart D
Acta Crystallogr A 49 ( Pt 1) 45-55 (1993)
PMID: 8382928

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
hetero 240-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-522694 (preferred)
Entry contents:
4 distinct polypeptide molecules
Macromolecules (4 distinct):
Capsid proteins P88 Chain: 1
Molecule details ›
Chain: 1
Length: 213 amino acids
Theoretical weight: 23.81 KDa
Source organism: Foot-and-mouth disease virus
Expression system: Not provided
UniProt:
  • Canonical: Q84771 (Residues: 508-720; Coverage: 30%)
Sequence domains: Picornavirus coat protein
Structure domains: Jelly Rolls
Capsid proteins P88 Chain: 2
Molecule details ›
Chain: 2
Length: 218 amino acids
Theoretical weight: 24.37 KDa
Source organism: Foot-and-mouth disease virus
Expression system: Not provided
UniProt:
  • Canonical: Q84771 (Residues: 70-287; Coverage: 30%)
Sequence domains: picornavirus capsid protein
Structure domains: Jelly Rolls
Capsid proteins P88 Chain: 3
Molecule details ›
Chain: 3
Length: 220 amino acids
Theoretical weight: 23.86 KDa
Source organism: Foot-and-mouth disease virus
Expression system: Not provided
UniProt:
  • Canonical: Q84771 (Residues: 288-507; Coverage: 31%)
Sequence domains: picornavirus capsid protein
Structure domains: Jelly Rolls
Capsid Chain: 4
Molecule details ›
Chain: 4
Length: 85 amino acids
Theoretical weight: 8.78 KDa
Source organism: Foot-and-mouth disease virus
Expression system: Not provided
UniProt:
  • Canonical: O90754 (Residues: 1-85; Coverage: 11%)
Sequence domains: Viral protein VP4 subunit
Structure domains: Capsid protein VP4 superfamily, Picornavirus

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: I23
Unit cell:
a: 345Å b: 345Å c: 345Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.169 0.169 not available
Expression system: Not provided

Quick links

Citations

2 review citations

Insights into virus capsid assembly from non-covalent mass spectrometry.
Morton et al. (2008)
1 more

16 mentions without citation

The pH stability of foot-and-mouth disease virus.
Yuan et al. (2017)
15 more