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CRYSTAL STRUCTURE OF CDC6P FROM PYROBACULUM AEROPHILUM

X-ray diffraction
2Å resolution
PDB entry 1fnn coloured by chain, front view.
PDB entry 1fnn coloured by chain, side view.
PDB entry 1fnn coloured by chain, top view.
Source organism: Pyrobaculum aerophilum
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: ORC1-type DNA replication protein
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Multimeric state: monomeric
Accessible surface area: 17949.18 Å2
Buried surface area: 893.07 Å2
Dissociation area: 81.81 Å2
Dissociation energy (ΔGdiss): 12.6 kcal/mol
Dissociation entropy (TΔSdiss): -1.46 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-187433
Monomeric assembly 1 of PDB entry 1fnn coloured by chemically distinct molecules, front view.
Monomeric assembly 1 of PDB entry 1fnn coloured by chemically distinct molecules, side view.
Monomeric assembly 1 of PDB entry 1fnn coloured by chemically distinct molecules, top view.
    Assembly 1
Confidence : 95%
No. subunits : 1
Symmetry : None
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3DComplex & QSbio predictionx
No. subunits : 1
Symmetry : None
Evidence : This biological assembly agrees with the prediction of both PISA & EPPIC
Assembly 2
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Assembly Name: ORC1-type DNA replication protein
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Multimeric state: monomeric
Accessible surface area: 17860.7 Å2
Buried surface area: 890.41 Å2
Dissociation area: 81.09 Å2
Dissociation energy (ΔGdiss): 12.61 kcal/mol
Dissociation entropy (TΔSdiss): -1.46 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-187433
Monomeric assembly 2 of PDB entry 1fnn coloured by chemically distinct molecules, front view.
Monomeric assembly 2 of PDB entry 1fnn coloured by chemically distinct molecules, side view.
Monomeric assembly 2 of PDB entry 1fnn coloured by chemically distinct molecules, top view.

Macromolecules

ORC1-type DNA replication protein
Chains: A, B
Length: 389 amino acids
Theoretical weight: 44.26 KDa
Source organism: Pyrobaculum aerophilum
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8ZYK1 (Residues: 1-389; Coverage: 100%)
Gene name: PAE0737
Pfam:
InterPro:
CATH:
SCOP:
ORC1-type DNA replication protein in PDB entry 1fnn, assembly 1, front view.
ORC1-type DNA replication protein in PDB entry 1fnn, assembly 1, side view.
ORC1-type DNA replication protein in PDB entry 1fnn, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q8ZYK1  
138950100150200250300350
 
100200300MAIVVDDSVFSPSYVPKRLPHREQQLQQLDILLGNWLRNPGHHYPRATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAIIGEIARSLNIPFPRRGLSRDEFLALLVEHLRERDLYMFLVLDDAFNLAPDILSTFIRLGQEADKLGAFRIALVIVGHNDAVLNNLDPSTRGIMGKYVIRFSPYTKDQIFDILLDRAKAGLAEGSYSEDILQMIADITGAQTPLDTNRGDARLAIDILYRSAYAAQQNGRKHIAPEDVRKSSKEVLFGISEEVLIGLPLHEKLFLLAIVRSLKISHTPYITFGDAEESYKIVCEEYGERPRVHSQLWSYLNDLREKGIVETRQNKRGEGVRGRTTLISIGTEPLDTLEAVITKLIKEELR
UniProt
Q8ZYK1
Chains
Domains
Secondary structure
Flexibility predictions
Early folding residue predictions
Ligand binding sites
Sequence conservation
Molecule details ›

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