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STRUCTURE DETERMINATION OF FELINE PANLEUKOPENIA VIRUS EMPTY PARTICLES

X-ray diffraction
3.3Å resolution
PDB entry 1fpv coloured by chain, front view.
PDB entry 1fpv coloured by chain, side view.
PDB entry 1fpv coloured by chain, top view.
Source organism: Feline panleukopenia virus
Assembly composition:
homo 60-mer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Capsid protein VP1
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Multimeric state: homo 60-mer
Accessible surface area: 876523.49 Å2
Buried surface area: 1004585.51 Å2
Dissociation area: 186,012.79 Å2
Dissociation energy (ΔGdiss): 1,897.82 kcal/mol
Dissociation entropy (TΔSdiss): 371.79 kcal/mol
Symmetry number: 60
PDBe Complex ID: PDB-CPX-150297

Macromolecules

Capsid protein VP1
Chain: A
Length: 584 amino acids
Theoretical weight: 64.76 KDa
Source organism: Feline panleukopenia virus
Expression system: Not provided
UniProt:
  • Canonical: P24840 (Residues: 144-727; Coverage: 80%)
  • Best match: P24840-2 (Residues: 1-584)
Pfam: Parvovirus coat protein VP2
InterPro:
CATH: Parvovirus coat protein VP1/VP2
SCOP: Parvoviridae-like VP
Capsid protein VP1 in PDB entry 1fpv, assembly 1, front view.
Capsid protein VP1 in PDB entry 1fpv, assembly 1, side view.
Capsid protein VP1 in PDB entry 1fpv, assembly 1, top view.
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