Structure analysis

Complex of Arl2 and PDE delta, Crystal Form 2 (SeMet)

X-ray diffraction
2.6Å resolution
Source organisms:
Assembly composition:
hetero dimer (preferred)
Entry contents: 2 distinct polypeptide molecules

Assemblies

Assembly 1 (preferred)
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Multimeric state: hetero dimer
Accessible surface area: 14154.6 Å2
Buried surface area: 3891.93 Å2
Dissociation area: 828.15 Å2
Dissociation energy (ΔGdiss): 0.22 kcal/mol
Dissociation entropy (TΔSdiss): 11.72 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-129180

Macromolecules

Chain: A
Length: 186 amino acids
Theoretical weight: 21.3 KDa
Source organism: Mus musculus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9D0J4 (Residues: 1-184; Coverage: 100%)
Gene name: Arl2
Pfam: ADP-ribosylation factor family
InterPro:
CATH: P-loop containing nucleotide triphosphate hydrolases
SCOP: G proteins
PDBe-KB: UniProt Coverage View: Q9D0J4  
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Chain: B
Length: 152 amino acids
Theoretical weight: 17.9 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: O43924 (Residues: 1-150; Coverage: 100%)
Gene names: PDE6D, PDED
Pfam: GMP-PDE, delta subunit
InterPro:
CATH: GMP phosphodiesterase, delta subunit
SCOP: RhoGDI-like
PDBe-KB: UniProt Coverage View: O43924  
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