Structure analysis

YCDX PROTEIN, TRINUCLEAR ZINC SITE

X-ray diffraction
2.3Å resolution
Source organism: Escherichia coli
Assembly composition:
homo trimer (preferred)
Entry contents: 1 distinct polypeptide molecule

Assemblies

Assembly 1 (preferred)
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Multimeric state: homo trimer
Accessible surface area: 25821.07 Å2
Buried surface area: 5888.33 Å2
Dissociation area: 1,884.04 Å2
Dissociation energy (ΔGdiss): 30.46 kcal/mol
Dissociation entropy (TΔSdiss): 26.14 kcal/mol
Symmetry number: 3
PDBe Complex ID: PDB-CPX-160022

Macromolecules

Chain: A
Length: 245 amino acids
Theoretical weight: 26.93 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P75914 (Residues: 1-245; Coverage: 100%)
Gene names: JW1017, b1034, ycdX
Pfam: PHP domain
InterPro:
CATH: Metal-dependent hydrolases
SCOP: PHP domain

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