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Structure of the Neurospora SET domain protein DIM-5, a histone lysine methyltransferase

X-ray diffraction
1.98Å resolution
PDB entry 1ml9 coloured by chain, front view.
PDB entry 1ml9 coloured by chain, side view.
PDB entry 1ml9 coloured by chain, top view.
Source organism: Neurospora crassa
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Histone-lysine N-methyltransferase, H3 lysine-9 specific dim-5
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Multimeric state: monomeric
Accessible surface area: 223.37 Å2
Buried surface area: 70.08 Å2
Dissociation area: 0 Å2
Dissociation energy (ΔGdiss): 0 kcal/mol
Dissociation entropy (TΔSdiss): 0 kcal/mol
Symmetry number: 4
PDBe Complex ID: PDB-CPX-186830

Macromolecules

Histone-lysine N-methyltransferase, H3 lysine-9 specific dim-5
Chain: A
Length: 302 amino acids
Theoretical weight: 34.11 KDa
Source organism: Neurospora crassa
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q8X225 (Residues: 30-331; Coverage: 91%)
Gene names: 29E8.110, NCU04402, dim-5
Pfam:
InterPro:
CATH: SET domain
SCOP: Histone lysine methyltransferases
Histone-lysine N-methyltransferase, H3 lysine-9 specific dim-5 in PDB entry 1ml9, assembly 1, front view.
Histone-lysine N-methyltransferase, H3 lysine-9 specific dim-5 in PDB entry 1ml9, assembly 1, side view.
Histone-lysine N-methyltransferase, H3 lysine-9 specific dim-5 in PDB entry 1ml9, assembly 1, top view.
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