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Crystal structure of the human myeloid cell activating receptor TREM-1

Source organism: Homo sapiens
Biochemical function: not assigned
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF07686
Domain description: Immunoglobulin V-set domain
Occurring in:
  1. Triggering receptor expressed on myeloid cells 1
The deposited structure of PDB entry 1q8m contains 4 copies of Pfam domain PF07686 (Immunoglobulin V-set domain) in Triggering receptor expressed on myeloid cells 1. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR036179
Domain description: Immunoglobulin-like domain superfamily
Occurring in:
  1. Triggering receptor expressed on myeloid cells 1
IPR013106
Domain description: Immunoglobulin V-set domain
Occurring in:
  1. Triggering receptor expressed on myeloid cells 1
IPR003599
Domain description: Immunoglobulin domain subtype
Occurring in:
  1. Triggering receptor expressed on myeloid cells 1
IPR013783
Domain description: Immunoglobulin-like fold
Occurring in:
  1. Triggering receptor expressed on myeloid cells 1

Structure domain

CATH CATH domain
2.60.40.10
Class: Mainly Beta
Architecture: Sandwich
Topology: Immunoglobulin-like
Homology: Immunoglobulins
Occurring in:
  1. Triggering receptor expressed on myeloid cells 1
The deposited structure of PDB entry 1q8m contains 4 copies of CATH domain 2.60.40.10 (Immunoglobulin-like) in Triggering receptor expressed on myeloid cells 1. Showing 1 copy in chain A.
SCOP SCOP annotation
48727
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Occurring in:
  1. Triggering receptor expressed on myeloid cells 1
The deposited structure of PDB entry 1q8m contains 4 copies of SCOP domain 48727 (V set domains (antibody variable domain-like)) in Triggering receptor expressed on myeloid cells 1. Showing 1 copy in chain A.

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