› › Function and Biology

S45-18 Fab pentasaccharide bisphosphate complex

Source organism: Mus musculus
Biochemical function: metal ion binding
Biological process: not assigned
Cellular component: not assigned

Quick links

GO terms

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence families

Pfam Protein families (Pfam)
PF07654
Domain description: Immunoglobulin C1-set domain
Occurring in:
  1. Ig-like domain-containing protein
  2. Ig-like domain-containing protein
The deposited structure of PDB entry 1q9w contains 2 copies of Pfam domain PF07654 (Immunoglobulin C1-set domain) in Ig-like domain-containing protein. Showing 1 copy in chain A.
The deposited structure of PDB entry 1q9w contains 2 copies of Pfam domain PF07654 (Immunoglobulin C1-set domain) in Ig-like domain-containing protein. Showing 1 copy in chain B.

PF07686
Domain description: Immunoglobulin V-set domain
Occurring in:
  1. Ig-like domain-containing protein
  2. Ig-like domain-containing protein
The deposited structure of PDB entry 1q9w contains 2 copies of Pfam domain PF07686 (Immunoglobulin V-set domain) in Ig-like domain-containing protein. Showing 1 copy in chain A.
The deposited structure of PDB entry 1q9w contains 2 copies of Pfam domain PF07686 (Immunoglobulin V-set domain) in Ig-like domain-containing protein. Showing 1 copy in chain B.

InterPro InterPro annotations
IPR003597
Domain description: Immunoglobulin C1-set
Occurring in:
  1. Ig-like domain-containing protein
  2. Ig-like domain-containing protein
IPR013106
Domain description: Immunoglobulin V-set domain
Occurring in:
  1. Ig-like domain-containing protein
  2. Ig-like domain-containing protein
IPR036179
Domain description: Immunoglobulin-like domain superfamily
Occurring in:
  1. Ig-like domain-containing protein
  2. Ig-like domain-containing protein
IPR013783
Domain description: Immunoglobulin-like fold
Occurring in:
  1. Ig-like domain-containing protein
  2. Ig-like domain-containing protein
IPR007110
Domain description: Immunoglobulin-like domain
Occurring in:
  1. Ig-like domain-containing protein
  2. Ig-like domain-containing protein
IPR003599
Domain description: Immunoglobulin domain subtype
Occurring in:
  1. Ig-like domain-containing protein
  2. Ig-like domain-containing protein
IPR003006
Domain description: Immunoglobulin/major histocompatibility complex, conserved site
Occurring in:
  1. Ig-like domain-containing protein

Structure domain

CATH CATH domain
2.60.40.10
Class: Mainly Beta
Architecture: Sandwich
Topology: Immunoglobulin-like
Homology: Immunoglobulins
Occurring in:
  1. Ig-like domain-containing protein
  2. Ig-like domain-containing protein
The deposited structure of PDB entry 1q9w contains 4 copies of CATH domain 2.60.40.10 (Immunoglobulin-like) in Ig-like domain-containing protein. Showing 2 copies in chain A.
The deposited structure of PDB entry 1q9w contains 4 copies of CATH domain 2.60.40.10 (Immunoglobulin-like) in Ig-like domain-containing protein. Showing 2 copies in chain B.
SCOP SCOP annotations
48942
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Occurring in:
  1. Ig-like domain-containing protein
  2. Ig-like domain-containing protein
The deposited structure of PDB entry 1q9w contains 2 copies of SCOP domain 48942 (C1 set domains (antibody constant domain-like)) in Ig-like domain-containing protein. Showing 1 copy in chain A.
The deposited structure of PDB entry 1q9w contains 2 copies of SCOP domain 48942 (C1 set domains (antibody constant domain-like)) in Ig-like domain-containing protein. Showing 1 copy in chain B.
48727
Class: All beta proteins
Fold: Immunoglobulin-like beta-sandwich
Superfamily: Immunoglobulin
Occurring in:
  1. Ig-like domain-containing protein
  2. Ig-like domain-containing protein
The deposited structure of PDB entry 1q9w contains 2 copies of SCOP domain 48727 (V set domains (antibody variable domain-like)) in Ig-like domain-containing protein. Showing 1 copy in chain A.
The deposited structure of PDB entry 1q9w contains 2 copies of SCOP domain 48727 (V set domains (antibody variable domain-like)) in Ig-like domain-containing protein. Showing 1 copy in chain B.

Quick links