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1930 H1 Hemagglutinin in complex with LSTC

X-ray diffraction
2.5Å resolution
PDB entry 1rvt coloured by chain, front view.
PDB entry 1rvt coloured by chain, side view.
PDB entry 1rvt coloured by chain, top view.
Source organism: unidentified influenza virus
Assembly composition:
hetero hexamer (preferred)
Entry contents: 2 distinct polypeptide molecules

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Hemagglutinin HA2 chain
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Multimeric state: hetero hexamer
Accessible surface area: 57265.28 Å2
Buried surface area: 32269.72 Å2
Dissociation area: 6,039.66 Å2
Dissociation energy (ΔGdiss): 39.25 kcal/mol
Dissociation entropy (TΔSdiss): 31.83 kcal/mol
Symmetry number: 3
PDBe Complex ID: PDB-CPX-182646

Macromolecules

Hemagglutinin
Chains: H, J, L
Length: 328 amino acids
Theoretical weight: 36.06 KDa
Source organism: unidentified influenza virus
UniProt:
  • Canonical: Q82500 (Residues: 14-340; Coverage: 58%)
Gene name: HA
Pfam: Haemagglutinin
InterPro:
CATH:
SCOP: Influenza hemagglutinin headpiece
Hemagglutinin in PDB entry 1rvt, assembly 1, front view.
Hemagglutinin in PDB entry 1rvt, assembly 1, side view.
Hemagglutinin in PDB entry 1rvt, assembly 1, top view.
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Hemagglutinin HA2 chain
Chains: I, K, M
Length: 160 amino acids
Theoretical weight: 18.18 KDa
Source organism: unidentified influenza virus
UniProt:
  • Canonical: Q82500 (Residues: 345-504; Coverage: 28%)
Gene name: HA
InterPro:
CATH: Hemagglutinin Ectodomain; Chain B
SCOP: Influenza hemagglutinin (stalk)
Hemagglutinin HA2 chain in PDB entry 1rvt, assembly 1, front view.
Hemagglutinin HA2 chain in PDB entry 1rvt, assembly 1, side view.
Hemagglutinin HA2 chain in PDB entry 1rvt, assembly 1, top view.
Molecule details ›

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