1rvt

X-ray diffraction
2.5Å resolution

1930 H1 Hemagglutinin in complex with LSTC

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-182646 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (4 distinct):
Hemagglutinin Chains: H, J, L
Molecule details ›
Chains: H, J, L
Length: 328 amino acids
Theoretical weight: 36.06 KDa
Source organism: unidentified influenza virus
UniProt:
  • Canonical: Q82500 (Residues: 14-340; Coverage: 58%)
Gene name: HA
Sequence domains: Haemagglutinin
Structure domains:
Hemagglutinin HA2 chain Chains: I, K, M
Molecule details ›
Chains: I, K, M
Length: 160 amino acids
Theoretical weight: 18.18 KDa
Source organism: unidentified influenza virus
UniProt:
  • Canonical: Q82500 (Residues: 345-504; Coverage: 28%)
Gene name: HA
Structure domains: Hemagglutinin Ectodomain; Chain B

Ligands and Environments

Carbohydrate polymer : NEW Components: GAL, SIA
Carbohydrate polymer : NEW Components: GAL, SIA, BGC, NAG
1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SRS BEAMLINE PX9.6
Spacegroup: C2
Unit cell:
a: 204.296Å b: 83.3Å c: 177.38Å
α: 90° β: 106.15° γ: 90°
R-values:
R R work R free
0.217 0.217 0.247