› › Structure analysis

Unmodified preinsertion binary complex

X-ray diffraction
2.7Å resolution
PDB entry 2au0 coloured by chain, front view.
PDB entry 2au0 coloured by chain, side view.
PDB entry 2au0 coloured by chain, top view.
Source organism: Saccharolobus solfataricus
Assembly composition:
hetero trimer (preferred)
Entry contents: 1 distinct polypeptide molecule
2 distinct DNA molecules

Quick links

Assemblies

Assembly 1 (preferred)
Download    3D Visualisation
Assembly Name: DNA polymerase IV and DNA
hide full assembly name
Multimeric state: hetero trimer
Accessible surface area: 20503.37 Å2
Buried surface area: 4491.97 Å2
Dissociation area: 1,225.83 Å2
Dissociation energy (ΔGdiss): 18.65 kcal/mol
Dissociation entropy (TΔSdiss): 10.53 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-115089
Assembly 2
Download    3D Visualisation
Assembly Name: DNA polymerase IV and DNA
hide full assembly name
Multimeric state: hetero trimer
Accessible surface area: 20731.19 Å2
Buried surface area: 4429.22 Å2
Dissociation area: 1,223.32 Å2
Dissociation energy (ΔGdiss): 28.19 kcal/mol
Dissociation entropy (TΔSdiss): 10.55 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-115089

Macromolecules

DNA polymerase IV
Chains: A, B
Length: 360 amino acids
Theoretical weight: 40.83 KDa
Source organism: Saccharolobus solfataricus
Expression system: Escherichia coli
UniProt:
  • Canonical: Q97W02 (Residues: 2-352; Coverage: 100%)
Gene names: SSO2448, dbh, dpo4
Pfam:
InterPro:
CATH:
SCOP:
DNA polymerase IV in PDB entry 2au0, assembly 1, front view.
DNA polymerase IV in PDB entry 2au0, assembly 1, side view.
DNA polymerase IV in PDB entry 2au0, assembly 1, top view.
Molecule details ›

Search similar proteins

DNA chains D, H
Name: 5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3'
Representative chains: D, H
Source organism: Saccharolobus solfataricus [2287]
Expression system: Not provided
Length: 13 nucleotides
Theoretical weight: 4.09 KDa
5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3' in PDB entry 2au0, assembly 1, front view.
5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3' in PDB entry 2au0, assembly 1, side view.
5'-D(*GP*GP*TP*TP*GP*GP*AP*TP*GP*GP*TP*AP*(DDG))-3' in PDB entry 2au0, assembly 1, top view.
Molecule details ›

Search similar DNA

DNA chains E, J
Name: 5'-D(*CP*TP*AP*AP*CP*G*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3'
Representative chains: E, J
Source organism: Saccharolobus solfataricus [2287]
Expression system: Not provided
Length: 19 nucleotides
Theoretical weight: 5.68 KDa
5'-D(*CP*TP*AP*AP*CP*G*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3' in PDB entry 2au0, assembly 1, front view.
5'-D(*CP*TP*AP*AP*CP*G*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3' in PDB entry 2au0, assembly 1, side view.
5'-D(*CP*TP*AP*AP*CP*G*CP*TP*AP*CP*CP*AP*TP*CP*CP*AP*AP*CP*C)-3' in PDB entry 2au0, assembly 1, top view.
Molecule details ›

Search similar DNA

Quick links