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X-RAY CRYSTAL STRUCTURE OF EQUINE INFECTIOUS ANEMIA VIRUS (EIAV) CAPSID PROTEIN P26

Source organism: Equine infectious anemia virus
Biochemical function: not assigned
Biological process: viral process
Cellular component: not assigned

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GO terms

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF19317
Domain description: Gag protein p24 C-terminal domain
Occurring in:
  1. Capsid protein p26
The deposited structure of PDB entry 2eia contains 2 copies of Pfam domain PF19317 (Gag protein p24 C-terminal domain) in Capsid protein p26. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR008919
Domain description: Retrovirus capsid, N-terminal
Occurring in:
  1. Capsid protein p26
IPR008916
Domain description: Retrovirus capsid, C-terminal
Occurring in:
  1. Capsid protein p26
IPR045345
Domain description: Retroviral nucleocapsid Gag protein p24, C-terminal domain
Occurring in:
  1. Capsid protein p26

Structure domains

CATH CATH domains
1.10.1200.30
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A
Homology: Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A
Occurring in:
  1. Capsid protein p26
The deposited structure of PDB entry 2eia contains 2 copies of CATH domain 1.10.1200.30 (Non-ribosomal Peptide Synthetase Peptidyl Carrier Protein; Chain A) in Capsid protein p26. Showing 1 copy in chain A.
1.10.375.10
Class: Mainly Alpha
Architecture: Orthogonal Bundle
Topology: Human Immunodeficiency Virus Type 1 Capsid Protein
Homology: Human Immunodeficiency Virus Type 1 Capsid Protein
Occurring in:
  1. Capsid protein p26
The deposited structure of PDB entry 2eia contains 2 copies of CATH domain 1.10.375.10 (Human Immunodeficiency Virus Type 1 Capsid Protein) in Capsid protein p26. Showing 1 copy in chain A.
SCOP SCOP annotations
47354
Class: All alpha proteins
Fold: Acyl carrier protein-like
Superfamily: Retrovirus capsid dimerization domain-like
Occurring in:
  1. Capsid protein p26
The deposited structure of PDB entry 2eia contains 2 copies of SCOP domain 47354 (Retrovirus capsid protein C-terminal domain) in Capsid protein p26. Showing 1 copy in chain A.
47944
Class: All alpha proteins
Fold: Retrovirus capsid protein, N-terminal core domain
Superfamily: Retrovirus capsid protein, N-terminal core domain
Occurring in:
  1. Capsid protein p26
The deposited structure of PDB entry 2eia contains 2 copies of SCOP domain 47944 (Retrovirus capsid protein, N-terminal core domain) in Capsid protein p26. Showing 1 copy in chain A.

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