› › Structure analysis

Apo & Sulphate bound forms of SDP-1

X-ray diffraction
2.7Å resolution
PDB entry 2j16 coloured by chain, front view.
PDB entry 2j16 coloured by chain, side view.
PDB entry 2j16 coloured by chain, top view.
Source organism: Saccharomyces cerevisiae
Assembly composition:
monomeric (preferred)
Entry contents: 2 distinct polypeptide molecules

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Assemblies

Assembly 1
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Assembly Name: Dual-specificity protein phosphatase SDP1
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Multimeric state: monomeric
Accessible surface area: 7231.6 Å2
Buried surface area: 0.0 Å2
Dissociation area: 0 Å2
Dissociation energy (ΔGdiss): 0 kcal/mol
Dissociation entropy (TΔSdiss): 0 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-154121
Assembly 2 (preferred)
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Assembly Name: Dual-specificity protein phosphatase SDP1
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Multimeric state: monomeric
Accessible surface area: 7443.79 Å2
Buried surface area: 602.48 Å2
Dissociation area: 50.76 Å2
Dissociation energy (ΔGdiss): 5.12 kcal/mol
Dissociation entropy (TΔSdiss): 0.58 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-154121

Macromolecules

Dual-specificity protein phosphatase SDP1
Chain: A
Length: 182 amino acids
Theoretical weight: 20.9 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P40479 (Residues: 17-198; Coverage: 87%)
Gene names: SDP1, YIL113W
Pfam: Dual specificity phosphatase, catalytic domain
InterPro:
CATH: Protein tyrosine phosphatase superfamily
Dual-specificity protein phosphatase SDP1 in PDB entry 2j16, assembly 1, front view.
Dual-specificity protein phosphatase SDP1 in PDB entry 2j16, assembly 1, side view.
Dual-specificity protein phosphatase SDP1 in PDB entry 2j16, assembly 1, top view.
PDBe-KB: UniProt Coverage View: P40479  
118220406080100120140160180
 
50100150
UniProt
P40479
Chains
Domains
Secondary structure
Flexibility predictions
Early folding residue predictions
Molecule details ›

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Dual-specificity protein phosphatase SDP1
Chain: B
Length: 182 amino acids
Theoretical weight: 20.87 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P40479 (Residues: 17-198; Coverage: 87%)
Gene names: SDP1, YIL113W
Pfam: Dual specificity phosphatase, catalytic domain
InterPro:
CATH: Protein tyrosine phosphatase superfamily
Dual-specificity protein phosphatase SDP1 in PDB entry 2j16, assembly 2, front view.
Dual-specificity protein phosphatase SDP1 in PDB entry 2j16, assembly 2, side view.
Dual-specificity protein phosphatase SDP1 in PDB entry 2j16, assembly 2, top view.
PDBe-KB: UniProt Coverage View: P40479  
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Molecule details ›

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