Protein Data Bank in Europe

Chain: 0
Length: 56 amino acids
Theoretical weight: 6.33 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0A7N4 (Residues: 2-57; Coverage: 98%)

Gene names: JW1075, b1089, rpmF
Pfam: Ribosomal L32p protein family
InterPro:

• Large ribosomal subunit protein bL32
• Zinc-binding ribosomal protein
• Large ribosomal subunit protein bL32, bacterial type

SCOP: Ribosomal protein L32p

Chain: 1
Length: 54 amino acids
Theoretical weight: 6.26 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0A7N9 (Residues: 2-55; Coverage: 98%)

Gene names: JW3611, b3636, rpmG
Pfam: Ribosomal protein L33
InterPro:

• Zinc-binding ribosomal protein
• Large ribosomal subunit protein bL33 superfamily
• Large ribosomal subunit protein bL33
• Large ribosomal subunit protein bL33, conserved site

SCOP: Ribosomal protein L33p

Chain: 2
Length: 46 amino acids
Theoretical weight: 5.4 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0A7P5 (Residues: 1-46; Coverage: 100%)

Gene names: JW3680, b3703, rimA, rpmH, ssaF
Pfam: Ribosomal protein L34
InterPro:

• Large ribosomal subunit protein bL34
• Large ribosomal subunit protein bL34, conserved site

SCOP: Ribosomal protein L34p

Chain: 3
Length: 64 amino acids
Theoretical weight: 7.18 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0A7Q1 (Residues: 2-65; Coverage: 99%)

Gene names: JW1707, b1717, rpmI
Pfam: Ribosomal protein L35
InterPro:

• Large ribosomal subunit protein bL35
• Large ribosomal subunit protein bL35-like
• Large ribosomal subunit protein bL35 superfamily
• Large ribosomal subunit protein bL35, conserved site

SCOP: Ribosomal protein L35p

Chain: 4
Length: 38 amino acids
Theoretical weight: 4.38 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0A7Q6 (Residues: 1-38; Coverage: 100%)

Gene names: JW3261, b3299, rpmJ
Pfam: Ribosomal protein L36
InterPro:

• Large ribosomal subunit protein bL36
• Large ribosomal subunit protein bL36 superfamily

SCOP: Ribosomal protein L36

Chain: 7
Length: 18 amino acids
Theoretical weight: 2.12 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: O62798 (Residues: 50-67; Coverage: 5%)

Gene name: RHO

Chain: 9
Length: 430 amino acids
Theoretical weight: 47.36 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0AGD7 (Residues: 2-431; Coverage: 95%)

Gene names: JW5414, b2610, ffh
Pfam:

• SRP54-type protein, helical bundle domain
• SRP54-type protein, GTPase domain
• Signal peptide binding domain

InterPro:

• Signal recognition particle protein
• Signal recognition particle SRP54, helical bundle
• Signal recognition particle, SRP54 subunit
• Signal recognition particle SRP54, N-terminal domain superfamily
• P-loop containing nucleoside triphosphate hydrolase
• AAA+ ATPase domain
• Signal recognition particle, SRP54 subunit, GTPase domain
• Signal recognition particle, SRP54 subunit, M-domain superfamily
• Signal recognition particle, SRP54 subunit, M-domain

Chain: C
Length: 267 amino acids
Theoretical weight: 29.25 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P60422 (Residues: 4-270; Coverage: 98%)

Gene names: JW3279, b3317, rplB
Pfam:

• Ribosomal Proteins L2, RNA binding domain
• Ribosomal Proteins L2, C-terminal domain

InterPro:

• Large ribosomal subunit protein uL2, bacterial/organellar-type
• Nucleic acid-binding, OB-fold
• Large ribosomal subunit protein uL2
• Large ribosomal subunit protein uL2, RNA-binding domain
• Large ribosomal subunit protein uL2, domain 2
• Large ribosomal subunit protein uL2, C-terminal
• Translation protein SH3-like domain superfamily
• Large ribosomal subunit protein uL2, domain 3
• Large ribosomal subunit protein uL2, conserved site

SCOP:

• Cold shock DNA-binding domain-like
• C-terminal domain of ribosomal protein L2

Chain: D
Length: 209 amino acids
Theoretical weight: 22.28 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P60438 (Residues: 1-209; Coverage: 100%)

Gene names: JW3282, b3320, rplC
Pfam: Ribosomal protein L3
InterPro:

• Translation protein, beta-barrel domain superfamily
• Large ribosomal subunit protein uL3, bacterial/organelle-type
• Large ribosomal subunit protein uL3
• Large ribosomal subunit protein uL3, conserved site

SCOP: Ribosomal protein L3

Chain: E
Length: 201 amino acids
Theoretical weight: 22.12 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P60723 (Residues: 1-201; Coverage: 100%)

Gene names: JW3281, b3319, eryA, rplD
Pfam: Ribosomal protein L4/L1 family
InterPro:

• Large ribosomal subunit protein uL4 domain superfamily
• Large ribosomal subunit protein uL4-like
• Large ribosomal subunit protein uL4

SCOP: Ribosomal protein L4

Chain: F
Length: 178 amino acids
Theoretical weight: 20.2 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P62399 (Residues: 2-179; Coverage: 99%)

Gene names: JW3270, b3308, rplE
Pfam:

• Ribosomal protein L5
• ribosomal L5P family C-terminus

InterPro:

• Large ribosomal subunit protein uL5
• Large ribosomal subunit protein uL5, bacterial-type
• Large ribosomal subunit protein uL5 domain superfamily
• Large ribosomal subunit protein uL5, N-terminal
• Large ribosomal subunit protein uL5, conserved site
• Large ribosomal subunit protein uL5, C-terminal

SCOP: Ribosomal protein L5

Chain: G
Length: 176 amino acids
Theoretical weight: 18.8 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0AG55 (Residues: 2-177; Coverage: 99%)

Gene names: JW3267, b3305, rplF
Pfam: Ribosomal protein L6
InterPro:

• Large ribosomal subunit protein uL6-like
• Large ribosomal subunit protein uL6, bacterial-type
• Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily
• Large ribosomal subunit protein uL6, alpha-beta domain
• Large ribosomal subunit protein uL6, conserved site

SCOP: Ribosomal protein L6

Chain: H
Length: 149 amino acids
Theoretical weight: 15.79 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0A7R1 (Residues: 1-149; Coverage: 100%)

Gene names: JW4161, b4203, rplI
Pfam:

• Ribosomal protein L9, N-terminal domain
• Ribosomal protein L9, C-terminal domain

InterPro:

• Large ribosomal subunit protein bL9
• Large ribosomal subunit protein bL9/RNase H1, N-terminal
• Large ribosomal subunit protein bL9, N-terminal
• Large ribosomal subunit protein bL9, bacteria/chloroplast
• Large ribosomal subunit protein bL9, N-terminal domain superfamily
• Large ribosomal subunit protein bL9, C-terminal domain superfamily
• Large ribosomal subunit protein bL9, C-terminal

SCOP:

• Ribosomal protein L9 N-domain
• Ribosomal protein L9 C-domain

Chain: I
Length: 141 amino acids
Theoretical weight: 14.76 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0A7J7 (Residues: 2-142; Coverage: 99%)

Gene names: JW3946, b3983, relC, rplK
Pfam:

• Ribosomal protein L11, N-terminal domain
• Ribosomal protein L11, RNA binding domain

InterPro:

• Large ribosomal subunit protein uL11, N-terminal domain superfamily
• Ribosomal protein uL11
• Large ribosomal subunit protein uL11, bacterial-type
• Large ribosomal subunit protein uL11, N-terminal
• Large ribosomal subunit protein uL11, C-terminal domain superfamily
• Large ribosomal subunit protein uL11, C-terminal
• Large ribosomal subunit protein uL11, conserved site

SCOP:

• Ribosomal L11/L12e N-terminal domain
• Ribosomal protein L11, C-terminal domain

Chain: J
Length: 140 amino acids
Theoretical weight: 15.82 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0AA10 (Residues: 1-140; Coverage: 99%)

Gene names: JW3200, b3231, rplM
Pfam: Ribosomal protein L13
InterPro:

• Large ribosomal subunit protein uL13
• Large ribosomal subunit protein uL13 superfamily
• Large ribosomal subunit protein uL13, bacterial-type
• Large ribosomal subunit protein uL13, conserved site

SCOP: Ribosomal protein L13

Chain: K
Length: 121 amino acids
Theoretical weight: 13.32 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0ADY3 (Residues: 2-122; Coverage: 98%)

Gene names: JW3272, b3310, rplN
Pfam: Ribosomal protein L14p/L23e
InterPro:

• Large ribosomal subunit protein uL14
• Large ribosomal subunit protein uL14, bacterial-type
• Large ribosomal subunit protein uL14 superfamily
• Large ribosomal subunit protein uL14, conserved site

SCOP: Ribosomal protein L14

Chain: L
Length: 144 amino acids
Theoretical weight: 15.01 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P02413 (Residues: 1-144; Coverage: 100%)

Gene names: JW3263, b3301, rplO
Pfam: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
InterPro:

• Large ribosomal subunit protein uL15, bacterial-type
• Large ribosomal subunit protein uL15
• Large ribosomal subunit protein uL15/eL18 superfamily
• Large ribosomal subunit protein uL15/eL18
• Large ribosomal subunit protein uL15, conserved site

SCOP: Ribosomal proteins L15p and L18e

Chain: M
Length: 136 amino acids
Theoretical weight: 15.31 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0ADY7 (Residues: 1-136; Coverage: 100%)

Gene names: JW3275, b3313, rplP
Pfam: Ribosomal protein L16p/L10e
InterPro:

• Large ribosomal subunit protein uL16, bacterial-type
• Large ribosomal subunit protein uL16 superfamily
• Large ribosomal subunit protein uL16
• Large ribosomal subunit protein uL16 domain
• Large ribosomal subunit protein uL16, conserved site

SCOP: Ribosomal protein L16p

Chain: N
Length: 127 amino acids
Theoretical weight: 14.39 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0AG44 (Residues: 1-127; Coverage: 100%)

Gene names: JW3256, b3294, rplQ
Pfam: Ribosomal protein L17
InterPro:

• Large ribosomal subunit protein bL17
• Large ribosomal subunit protein bL17 superfamily
• Large ribosomal subunit protein bL17, conserved site

SCOP: Prokaryotic ribosomal protein L17

Chain: O
Length: 117 amino acids
Theoretical weight: 12.79 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0C018 (Residues: 1-117; Coverage: 100%)

Gene names: JW3266, b3304, rplR
Pfam: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
InterPro:

• Large ribosomal subunit protein uL18
• Large ribosomal subunit protein uL18, bacterial-type

SCOP: Ribosomal protein L18 and S11

Chain: P
Length: 114 amino acids
Theoretical weight: 13.03 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0A7K6 (Residues: 2-115; Coverage: 99%)

Gene names: JW2587, b2606, rplS
Pfam: Ribosomal protein L19
InterPro:

• Translation protein SH3-like domain superfamily
• Large ribosomal subunit protein bL19
• Large ribosomal subunit protein bL19 superfamily
• Large ribosomal subunit protein bL19, conserved site

SCOP: Ribosomal protein L19

Chain: Q
Length: 117 amino acids
Theoretical weight: 13.4 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0A7L3 (Residues: 2-118; Coverage: 99%)

Gene names: JW1706, b1716, pdzA, rplT
Pfam: Ribosomal protein L20
InterPro:

• Large ribosomal subunit protein bL20
• Ribosomal protein bL20, C-terminal

SCOP: Ribosomal protein L20

Chain: R
Length: 103 amino acids
Theoretical weight: 11.59 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0AG48 (Residues: 1-103; Coverage: 100%)

Gene names: JW3153, b3186, rplU
Pfam: Ribosomal prokaryotic L21 protein
InterPro:

• Large ribosomal subunit protein bL21
• Large ribosomal subunit protein bL21-like
• Large ribosomal subunit protein bL21-like superfamily
• Large ribosomal subunit protein bL21, conserved site

SCOP: Ribosomal protein L21p

Chain: S
Length: 110 amino acids
Theoretical weight: 12.25 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P61175 (Residues: 1-110; Coverage: 100%)

Gene names: JW3277, b3315, eryB, rplV
Pfam: Ribosomal protein L22p/L17e
InterPro:

• Large ribosomal subunit protein uL22, bacterial/chloroplast-type
• Ribosomal protein uL22 superfamily
• Large ribosomal subunit protein uL22, bacterial/organelle-type
• Large ribosomal subunit protein uL22
• Large ribosomal subunit protein uL22, conserved site

SCOP: Ribosomal protein L22

Chain: T
Length: 99 amino acids
Theoretical weight: 11.09 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0ADZ0 (Residues: 1-99; Coverage: 99%)

Gene names: JW3280, b3318, rplW
Pfam: Ribosomal protein L23
InterPro:

• Nucleotide-binding alpha-beta plait domain superfamily
• Ribosomal protein uL23/eL15/eS24 core domain superfamily
• Large ribosomal subunit protein uL23-like
• Large ribosomal subunit protein uL23, conserved site

SCOP: L23p

Chain: U
Length: 102 amino acids
Theoretical weight: 11.08 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P60624 (Residues: 2-103; Coverage: 98%)

Gene names: JW3271, b3309, rplX
Pfam:

• KOW motif
• Ribosomal proteins 50S L24/mitochondrial 39S L24

InterPro:

• Large ribosomal subunit protein uL2, domain 2
• Translation protein SH3-like domain superfamily
• Large ribosomal subunit protein uL24
• KOW
• Large ribosomal subunit protein uL24, conserved site
• Large ribosomal subunit protein uL24, KOW domain

SCOP: Ribosomal proteins L24p and L21e

Chain: V
Length: 94 amino acids
Theoretical weight: 10.71 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P68919 (Residues: 1-94; Coverage: 100%)

Gene names: JW2173, b2185, rplY
Pfam: Ribosomal L25p family
InterPro:

• Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily
• Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal
• Ribosomal protein bL25, short-form
• Large ribosomal subunit protein bL25, L25 domain

SCOP: Ribosomal protein L25-like

Chain: W
Length: 84 amino acids
Theoretical weight: 9.02 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0A7L8 (Residues: 2-85; Coverage: 99%)

Gene names: JW3152, b3185, rpmA
Pfam: Ribosomal L27 protein
InterPro:

• Large ribosomal subunit protein bL27
• Large ribosomal subunit protein bL27, conserved site

SCOP: Ribosomal L27 protein

Chain: X
Length: 63 amino acids
Theoretical weight: 7.29 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0A7M6 (Residues: 1-63; Coverage: 100%)

Gene names: JW3274, b3312, rpmC
Pfam: Ribosomal L29 protein
InterPro:

• Large ribosomal subunit protein uL29
• Large ribosomal subunit protein uL29 superfamily
• Large ribosomal subunit protein uL29, conserved site

SCOP: Ribosomal protein L29 (L29p)

Chain: Y
Length: 58 amino acids
Theoretical weight: 6.42 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0AG51 (Residues: 2-59; Coverage: 98%)

Gene names: JW3264, b3302, rpmD
Pfam: Ribosomal protein L30p/L7e
InterPro:

• Large ribosomal subunit protein uL30, bacterial-type
• Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily
• Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
• Large ribosomal subunit protein uL30, conserved site

SCOP: Ribosomal protein L30p/L7e

Chain: Z
Length: 70 amino acids
Theoretical weight: 7.89 KDa
Source organism: Escherichia coli K-12
Expression system: Escherichia coli K-12
UniProt:

• Canonical: P0A7M9 (Residues: 1-70; Coverage: 100%)

Gene names: JW3907, b3936, rpmE
Pfam: Ribosomal protein L31
InterPro:

• Large ribosomal subunit protein bL31 type A/B
• Large ribosomal subunit protein bL31 type A
• Large ribosomal subunit protein bL28/bL31-like superfamily
• Large ribosomal subunit protein bL31 superfamily

SCOP: Ribosomal protein L31p