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Structure of the UBA Domain of Human NBR1 in Complex with Ubiquitin

Solution NMR
PDB entry 2mj5 coloured by chain, front view.
PDB entry 2mj5 coloured by chain, side view.
PDB entry 2mj5 coloured by chain, top view.
Source organism: Homo sapiens
Assembly composition:
hetero dimer (preferred)
Entry contents: 2 distinct polypeptide molecules

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Next to BRCA1 gene 1 protein and Ubiquitin
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Multimeric state: hetero dimer
Accessible surface area: 7994.18 Å2
Buried surface area: 1316.49 Å2
Dissociation area: 658.24 Å2
Dissociation energy (ΔGdiss): 1.33 kcal/mol
Dissociation entropy (TΔSdiss): 9.86 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-143375

Macromolecules

Ubiquitin
Chain: A
Length: 76 amino acids
Theoretical weight: 8.58 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P0CG48 (Residues: 609-684; Coverage: 11%)
Gene name: UBC
Pfam: Ubiquitin family
InterPro:
Ubiquitin in PDB entry 2mj5, assembly 1, front view.
Ubiquitin in PDB entry 2mj5, assembly 1, side view.
Ubiquitin in PDB entry 2mj5, assembly 1, top view.
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Next to BRCA1 gene 1 protein
Chain: B
Length: 52 amino acids
Theoretical weight: 5.92 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q14596 (Residues: 913-959; Coverage: 5%)
Gene names: 1A13B, KIAA0049, M17S2, MIG19, NBR1
InterPro:
CATH: DNA helicase RuvA subunit, C-terminal domain
Next to BRCA1 gene 1 protein in PDB entry 2mj5, assembly 1, front view.
Next to BRCA1 gene 1 protein in PDB entry 2mj5, assembly 1, side view.
Next to BRCA1 gene 1 protein in PDB entry 2mj5, assembly 1, top view.
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