Structure analysis

Crystal structure of PPAR gamma complexed with partial agonist SF147

X-ray diffraction
2.407Å resolution
Source organism: Homo sapiens
Assembly composition:
homo dimer (preferred)
Entry contents: 1 distinct polypeptide molecule

Assemblies

Assembly 1 (preferred)
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Multimeric state: homo dimer
Accessible surface area: 23721.72 Å2
Buried surface area: 3755.03 Å2
Dissociation area: 925.99 Å2
Dissociation energy (ΔGdiss): -3.43 kcal/mol
Dissociation entropy (TΔSdiss): 13.13 kcal/mol
Symmetry number: 2
PDBe Complex ID: PDB-CPX-153379
    Assembly 1
Confidence : 98%
No. subunits : 2
Symmetry : C2
3DComplex & QSbio predictionx
No. subunits : 2
Symmetry : C2

Macromolecules

Chains: A, B
Length: 274 amino acids
Theoretical weight: 31.3 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P37231 (Residues: 233-505; Coverage: 54%)
Gene names: NR1C3, PPARG
Pfam: Ligand-binding domain of nuclear hormone receptor
InterPro:
CATH: Retinoid X Receptor
SCOP: Nuclear receptor ligand-binding domain
PDBe-KB: UniProt Coverage View: P37231  
127420406080100120140160180200220240260
 
100200
UniProt
P37231
Chains
Domains
Secondary structure
Flexibility predictions
Early folding residue predictions
Ligand binding sites
Interaction interfaces
Sequence conservation

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