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The X-ray structure of the Streptomyces coelicolor A3 Chondroitin AC Lyase in Complex with Chondroitin sulphate

X-ray diffraction
2.3Å resolution
PDB entry 2wda coloured by chain, front view.
PDB entry 2wda coloured by chain, side view.
PDB entry 2wda coloured by chain, top view.
Source organism: Streptomyces violaceoruber
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Secreted lyase
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Multimeric state: monomeric
Accessible surface area: 24513.52 Å2
Buried surface area: 5435.75 Å2
Dissociation area: 157.28 Å2
Dissociation energy (ΔGdiss): -7.06 kcal/mol
Dissociation entropy (TΔSdiss): 1.39 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-131475

Macromolecules

Secreted lyase
Chain: A
Length: 765 amino acids
Theoretical weight: 83.02 KDa
Source organism: Streptomyces violaceoruber
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O86516 (Residues: 33-776; Coverage: 100%)
Gene names: SC1C2.15, SCO5534
Pfam:
InterPro:
CATH:
Secreted lyase in PDB entry 2wda, assembly 1, front view.
Secreted lyase in PDB entry 2wda, assembly 1, side view.
Secreted lyase in PDB entry 2wda, assembly 1, top view.
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