Function and Biology

factor IXa superactive triple mutant, NaCl-soaked

Source organisms:
Biochemical function: serine-type endopeptidase activity
Biological process: proteolysis
Cellular component: not assigned

EC 3.4.21.22: Coagulation factor IXa

Reaction catalysed:
Selective cleavage of Arg-|-Ile bond in factor X to form factor Xa.
Alternative Name(s):
  • Activated Christmas factor
  • Activated blood coagulation factor XI
  • Activated blood-coagulation factor IX
  • Autoprothrombin II
  • Blood platelet cofactor II
  • Blood-coagulation factor IXa
  • Christmas factor

GO terms

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Sequence families

Pfam Protein families (Pfam)
PF00089
Domain description: Trypsin
Occurring in:
  1. Coagulation factor IXa heavy chain
The deposited structure of PDB entry 2wpj contains 1 copy of Pfam domain PF00089 (Trypsin) in Coagulation factor IXa heavy chain. Showing 1 copy in chain C [auth S].

PF14670
Domain description: Coagulation Factor Xa inhibitory site
Occurring in:
  1. Coagulation factor IXa light chain
The deposited structure of PDB entry 2wpj contains 1 copy of Pfam domain PF14670 (Coagulation Factor Xa inhibitory site) in Coagulation factor IXa light chain. Showing 1 copy in chain A [auth E].

InterPro InterPro annotations
IPR001314
Domain description: Peptidase S1A, chymotrypsin family
Occurring in:
  1. Coagulation factor IXa heavy chain
IPR001254
Domain description: Serine proteases, trypsin domain
Occurring in:
  1. Coagulation factor IXa heavy chain
IPR043504
Domain description: Peptidase S1, PA clan, chymotrypsin-like fold
Occurring in:
  1. Coagulation factor IXa heavy chain
IPR033116
Domain description: Serine proteases, trypsin family, serine active site
Occurring in:
  1. Coagulation factor IXa heavy chain
IPR018114
Domain description: Serine proteases, trypsin family, histidine active site
Occurring in:
  1. Coagulation factor IXa heavy chain
IPR009003
Domain description: Peptidase S1, PA clan
Occurring in:
  1. Coagulation factor IXa heavy chain

Structure domains

CATH CATH domains
2.40.10.10
Class: Mainly Beta
Architecture: Beta Barrel
Topology: Thrombin, subunit H
Homology: Trypsin-like serine proteases
Occurring in:
  1. Coagulation factor IXa heavy chain
The deposited structure of PDB entry 2wpj contains 2 copies of CATH domain 2.40.10.10 (Thrombin, subunit H) in Coagulation factor IXa heavy chain. Showing 2 copies in chain C [auth S].
2.10.25.10
Class: Mainly Beta
Architecture: Ribbon
Topology: Laminin
Homology: Laminin
Occurring in:
  1. Coagulation factor IXa light chain
The deposited structure of PDB entry 2wpj contains 1 copy of CATH domain 2.10.25.10 (Laminin) in Coagulation factor IXa light chain. Showing 1 copy in chain A [auth E].