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Crystal Structure of Pseudomonas Aeruginosa OpdO

X-ray diffraction
2.295Å resolution
PDB entry 2y0k coloured by chain, front view.
PDB entry 2y0k coloured by chain, side view.
PDB entry 2y0k coloured by chain, top view.
Source organism: Pseudomonas aeruginosa PAO1
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Pyroglutatmate porin OpdO
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Multimeric state: monomeric
Accessible surface area: 18854.4 Å2
Buried surface area: 3286.8 Å2
Dissociation area: 197.03 Å2
Dissociation energy (ΔGdiss): -8.12 kcal/mol
Dissociation entropy (TΔSdiss): 2.23 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-191281

Macromolecules

Pyroglutatmate porin OpdO
Chain: A
Length: 390 amino acids
Theoretical weight: 42.68 KDa
Source organism: Pseudomonas aeruginosa PAO1
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q9I202 (Residues: 26-409; Coverage: 100%)
Gene names: PA2113, opdO
Pfam: outer membrane porin, OprD family
InterPro:
CATH: Porin
Pyroglutatmate porin OpdO in PDB entry 2y0k, assembly 1, front view.
Pyroglutatmate porin OpdO in PDB entry 2y0k, assembly 1, side view.
Pyroglutatmate porin OpdO in PDB entry 2y0k, assembly 1, top view.
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