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Crystal structure of Corynebacterium glutamicum PimB' bound to GDP-Man (orthorhombic crystal form)

X-ray diffraction
2Å resolution
PDB entry 3okp coloured by chain, front view.
PDB entry 3okp coloured by chain, side view.
PDB entry 3okp coloured by chain, top view.
Source organism: Corynebacterium glutamicum
Assembly composition:
monomeric (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: GDP-mannose-dependent monoacylated alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase
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Multimeric state: monomeric
Accessible surface area: 15870.23 Å2
Buried surface area: 687.51 Å2
Dissociation area: 343.75 Å2
Dissociation energy (ΔGdiss): 4.02 kcal/mol
Dissociation entropy (TΔSdiss): 5.04 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-185614

Macromolecules

GDP-mannose-dependent monoacylated alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase
Chain: A
Length: 394 amino acids
Theoretical weight: 42.9 KDa
Source organism: Corynebacterium glutamicum
Expression system: Escherichia coli
UniProt:
  • Canonical: Q8NNK8 (Residues: 1-381; Coverage: 100%)
Gene names: Cgl2186, cg2400, pimB
Pfam:
InterPro:
CATH: Glycogen Phosphorylase B;
GDP-mannose-dependent monoacylated alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase in PDB entry 3okp, assembly 1, front view.
GDP-mannose-dependent monoacylated alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase in PDB entry 3okp, assembly 1, side view.
GDP-mannose-dependent monoacylated alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase in PDB entry 3okp, assembly 1, top view.
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