Assemblies
Assembly Name:
Formamidopyrimidine-DNA glycosylase and DNA
Multimeric state:
hetero trimer
Accessible surface area:
13615.64 Å2
Buried surface area:
2958.78 Å2
Dissociation area:
1,014.22
Å2
Dissociation energy (ΔGdiss):
7.86
kcal/mol
Dissociation entropy (TΔSdiss):
11
kcal/mol
Symmetry number:
1
PDBe Complex ID:
PDB-CPX-116873
Macromolecules
Chain: A
Length: 273 amino acids
Theoretical weight: 30.5 KDa
Source organism: Geobacillus stearothermophilus
Expression system: Escherichia coli BL21(DE3)
UniProt:
Pfam:
Length: 273 amino acids
Theoretical weight: 30.5 KDa
Source organism: Geobacillus stearothermophilus
Expression system: Escherichia coli BL21(DE3)
UniProt:
- Canonical:
P84131 (Residues: 2-274; Coverage: 100%)
Pfam:
- Formamidopyrimidine-DNA glycosylase N-terminal domain
- Formamidopyrimidine-DNA glycosylase H2TH domain
- Zinc finger found in FPG and IleRS
- Formamidopyrimidine-DNA glycosylase, catalytic domain
- Formamidopyrimidine-DNA glycosylase
- MutM-like, N-terminal
- Small ribosomal subunit protein uS13-like, H2TH
- DNA glycosylase/AP lyase, H2TH DNA-binding
- Zinc finger, DNA glycosylase/AP lyase-type
- Zinc finger, FPG/IleRS-type
- DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site
Name:
5'-D(*A*GP*GP*TP*AP*GP*AP*CP*AP*AP*GP*GP*AP*CP*GP*C)-3'
Representative chains: B
Source organism: Geobacillus stearothermophilus [1422]
Expression system: Not provided
Length: 16 nucleotides
Theoretical weight: 4.98 KDa
Representative chains: B
Source organism: Geobacillus stearothermophilus [1422]
Expression system: Not provided
Length: 16 nucleotides
Theoretical weight: 4.98 KDa
Name:
5'-D(*TP*GP*CP*GP*TP*C*CP*TP*TP*GP*TP*(CX2)P*TP*AP*CP*C)-3'
Representative chains: C
Source organism: Geobacillus stearothermophilus [1422]
Expression system: Not provided
Length: 16 nucleotides
Theoretical weight: 4.88 KDa
Representative chains: C
Source organism: Geobacillus stearothermophilus [1422]
Expression system: Not provided
Length: 16 nucleotides
Theoretical weight: 4.88 KDa