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Crystal structure of 6-aminohexanoate-dimer hydrolase G181D/R187S/H266N/D370Y mutant

X-ray diffraction
1.6Å resolution
PDB entry 3vwl coloured by chain, front view.
PDB entry 3vwl coloured by chain, side view.
PDB entry 3vwl coloured by chain, top view.
Source organism: Paenarthrobacter ureafaciens
Assembly composition:
homo dimer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: 6-aminohexanoate-dimer hydrolase
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Multimeric state: homo dimer
Accessible surface area: 27349.96 Å2
Buried surface area: 11549.58 Å2
Dissociation area: 3,135.97 Å2
Dissociation energy (ΔGdiss): 42.76 kcal/mol
Dissociation entropy (TΔSdiss): 14.52 kcal/mol
Symmetry number: 2
PDBe Complex ID: PDB-CPX-139360

Macromolecules

6-aminohexanoate-dimer hydrolase
Chain: A
Length: 392 amino acids
Theoretical weight: 42.85 KDa
Source organism: Paenarthrobacter ureafaciens
Expression system: Escherichia coli
UniProt:
  • Canonical: P07061 (Residues: 1-28, 181-208, 266-296; Coverage: 22%)
  • Canonical: P07062 (Residues: 29-180, 209-265, 297-392; Coverage: 78%)
    • nullnull
Gene names: nylB, nylB'
Pfam: Beta-lactamase
InterPro:
CATH:
6-aminohexanoate-dimer hydrolase in PDB entry 3vwl, assembly 1, front view.
6-aminohexanoate-dimer hydrolase in PDB entry 3vwl, assembly 1, side view.
6-aminohexanoate-dimer hydrolase in PDB entry 3vwl, assembly 1, top view.
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