› 4ds2

X-ray diffraction
2.63Å resolution

Ubiquitin conjugating enzyme (putative) from Trypanosoma cruzi

Released:
DOI: 10.2210/pdb4ds2/pdb
Model geometry
Fit model/data
PDB entry 4ds2 coloured by chain, front view.
PDB entry 4ds2 coloured by chain, side view.
PDB entry 4ds2 coloured by chain, top view.
Source organism: Trypanosoma cruzi
Entry authors: Merritt EA, Structural Genomics of Pathogenic Protozoa Consortium (SGPP)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-175474 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
UBC core domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 167 amino acids
Theoretical weight: 18.73 KDa
Source organism: Trypanosoma cruzi
Expression system: Escherichia coli
UniProt:
  • Canonical: Q4DIQ3 (Residues: 1-163; Coverage: 100%)
Gene name: Tc00.1047053506635.90
Sequence domains: Ubiquitin-conjugating enzyme
Structure domains: Ubiquitin Conjugating Enzyme

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.2.2
Spacegroup: P212121
Unit cell:
a: 60.139Å b: 70.376Å c: 99.117Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.231 0.229 0.273
Expression system: Escherichia coli

Quick links

PDB-REDO

The sliders below show the change in model quality between original PDB entry and the PDB-REDO entry

Model Geometry
 
 
Data not available
DNA/RNA Geometry
 
 
Data not available
Fit model/data
 
 
Data not available
PDB-REDO