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Crystal structure of PfbA, a surface adhesin of Streptococcus pneumoniae

Source organism: Streptococcus pneumoniae R6
Biochemical function: not assigned
Biological process: not assigned
Cellular component: not assigned

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GO terms

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Sequence families

Pfam Protein families (Pfam)
PF13229
Domain description: Right handed beta helix region
Occurring in:
  1. Plasmin and fibronectin-binding protein A
The deposited structure of PDB entry 4mr0 contains 2 copies of Pfam domain PF13229 (Right handed beta helix region) in Plasmin and fibronectin-binding protein A. Showing 1 copy in chain A.

PF12708
Domain description: Pectate lyase superfamily protein
Occurring in:
  1. Plasmin and fibronectin-binding protein A
The deposited structure of PDB entry 4mr0 contains 2 copies of Pfam domain PF12708 (Pectate lyase superfamily protein) in Plasmin and fibronectin-binding protein A. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR006626
Domain description: Parallel beta-helix repeat
Occurring in:
  1. Plasmin and fibronectin-binding protein A
IPR039448
Domain description: Right handed beta helix domain
Occurring in:
  1. Plasmin and fibronectin-binding protein A
IPR024535
Domain description: Rhamnogalacturonase A/B/Epimerase-like, pectate lyase domain
Occurring in:
  1. Plasmin and fibronectin-binding protein A
IPR012334
Domain description: Pectin lyase fold
Occurring in:
  1. Plasmin and fibronectin-binding protein A
IPR011050
Domain description: Pectin lyase fold/virulence factor
Occurring in:
  1. Plasmin and fibronectin-binding protein A
IPR038052
Domain description: Chaperonin-like RbcX superfamily
Occurring in:
  1. Plasmin and fibronectin-binding protein A

Structure domain

CATH CATH domain
2.160.20.10
Class: Mainly Beta
Architecture: 3 Solenoid
Topology: Pectate Lyase C-like
Homology: Single-stranded right-handed beta-helix, Pectin lyase-like
Occurring in:
  1. Plasmin and fibronectin-binding protein A
The deposited structure of PDB entry 4mr0 contains 2 copies of CATH domain 2.160.20.10 (Pectate Lyase C-like) in Plasmin and fibronectin-binding protein A. Showing 1 copy in chain A.

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