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Crystal Structure of Vancomycin Resistance D,D-dipeptidase VanXYg in complex with D-Ala-D-Ala phosphinate analog

Source organism: Enterococcus faecalis
Biochemical function: metal ion binding
Biological process: proteolysis
Cellular component: not assigned

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GO terms

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF02557
Domain description: D-alanyl-D-alanine carboxypeptidase
Occurring in:
  1. Peptidase M15B domain-containing protein
The deposited structure of PDB entry 4muq contains 1 copy of Pfam domain PF02557 (D-alanyl-D-alanine carboxypeptidase) in Peptidase M15B domain-containing protein. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR009045
Domain description: Hedgehog signalling/DD-peptidase zinc-binding domain superfamily
Occurring in:
  1. Peptidase M15B domain-containing protein
IPR003709
Domain description: Peptidase M15B
Occurring in:
  1. Peptidase M15B domain-containing protein

Structure domains

CATH CATH domains
3.30.200.180
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Phosphorylase Kinase; domain 1
Homology: Phosphorylase Kinase; domain 1
Occurring in:
  1. Peptidase M15B domain-containing protein
The deposited structure of PDB entry 4muq contains 1 copy of CATH domain 3.30.200.180 (Phosphorylase Kinase; domain 1) in Peptidase M15B domain-containing protein. Showing 1 copy in chain A.
3.30.1380.10
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Muramoyl-pentapeptide Carboxypeptidase; domain 2
Homology: Muramoyl-pentapeptide Carboxypeptidase; domain 2
Occurring in:
  1. Peptidase M15B domain-containing protein
The deposited structure of PDB entry 4muq contains 1 copy of CATH domain 3.30.1380.10 (Muramoyl-pentapeptide Carboxypeptidase; domain 2) in Peptidase M15B domain-containing protein. Showing 1 copy in chain A.

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