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Crystal structure of the S505T mutant of TAL effector dHax3

X-ray diffraction
2.491Å resolution
PDB entry 4ot0 coloured by chain, front view.
PDB entry 4ot0 coloured by chain, side view.
PDB entry 4ot0 coloured by chain, top view.
Source organism: Xanthomonas campestris pv. armoraciae
Assembly composition:
hetero trimer (preferred)
Entry contents: 1 distinct polypeptide molecule
2 distinct DNA molecules

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Avirulence protein AvrBs3 and DNA
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Multimeric state: hetero trimer
Accessible surface area: 23834.83 Å2
Buried surface area: 5643.83 Å2
Dissociation area: 1,131.52 Å2
Dissociation energy (ΔGdiss): 31.74 kcal/mol
Dissociation entropy (TΔSdiss): 11.34 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-117947
Assembly 2
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Assembly Name: Avirulence protein AvrBs3 and DNA
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Multimeric state: hetero trimer
Accessible surface area: 24536.71 Å2
Buried surface area: 5218.45 Å2
Dissociation area: 959.68 Å2
Dissociation energy (ΔGdiss): 25.67 kcal/mol
Dissociation entropy (TΔSdiss): 11.21 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-117947

Macromolecules

Avirulence protein AvrBs3
Chains: A, B
Length: 499 amino acids
Theoretical weight: 51.77 KDa
Source organism: Xanthomonas campestris pv. armoraciae
Expression system: Escherichia coli
UniProt:
  • Canonical: Q3ZD72 (Residues: 231-720; Coverage: 51%)
Gene name: hax3
Pfam: TAL effector repeat
InterPro: TAL effector repeat
Avirulence protein AvrBs3 in PDB entry 4ot0, assembly 1, front view.
Avirulence protein AvrBs3 in PDB entry 4ot0, assembly 1, side view.
Avirulence protein AvrBs3 in PDB entry 4ot0, assembly 1, top view.
PDBe-KB: UniProt Coverage View: Q3ZD72  
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DNA chains G, I
Name: DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3')
Representative chains: G, I
Source organism: Xanthomonas campestris pv. armoraciae [329463]
Expression system: Not provided
Length: 17 nucleotides
Theoretical weight: 5.07 KDa
DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3') in PDB entry 4ot0, assembly 1, front view.
DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3') in PDB entry 4ot0, assembly 1, side view.
DNA (5'-D(*TP*GP*TP*CP*CP*CP*TP*TP*TP*AP*TP*CP*TP*CP*TP*CP*T)-3') in PDB entry 4ot0, assembly 1, top view.
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DNA chains H, J
Name: DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3')
Representative chains: H, J
Source organism: Xanthomonas campestris pv. armoraciae [329463]
Expression system: Not provided
Length: 17 nucleotides
Theoretical weight: 5.34 KDa
DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3') in PDB entry 4ot0, assembly 1, front view.
DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3') in PDB entry 4ot0, assembly 1, side view.
DNA (5'-D(*AP*GP*AP*GP*AP*GP*AP*TP*AP*AP*AP*GP*GP*GP*AP*CP*A)-3') in PDB entry 4ot0, assembly 1, top view.
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