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Crystal structure of Dln1 complexed with Man(alpha1-3)Man

X-ray diffraction
2.1Å resolution
PDB entry 4znr coloured by chain, front view.
PDB entry 4znr coloured by chain, side view.
PDB entry 4znr coloured by chain, top view.
Source organism: Danio rerio
Assembly composition:
homo dimer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Aerolysin-like protein
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Multimeric state: homo dimer
Accessible surface area: 30245.5 Å2
Buried surface area: 9092.89 Å2
Dissociation area: 1,654.72 Å2
Dissociation energy (ΔGdiss): -7.58 kcal/mol
Dissociation entropy (TΔSdiss): 14.43 kcal/mol
Symmetry number: 2
PDBe Complex ID: PDB-CPX-176957

Macromolecules

Aerolysin-like protein
Chains: A, B
Length: 335 amino acids
Theoretical weight: 36.48 KDa
Source organism: Danio rerio
Expression system: Escherichia coli
UniProt:
  • Canonical: Q5CZR5 (Residues: 1-315; Coverage: 100%)
Gene names: aep1, dln1, jac5, zgc:113413
Pfam: Jacalin-like lectin domain
InterPro:
Aerolysin-like protein in PDB entry 4znr, assembly 1, front view.
Aerolysin-like protein in PDB entry 4znr, assembly 1, side view.
Aerolysin-like protein in PDB entry 4znr, assembly 1, top view.
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