› › Structure analysis

Crystal structure of hRANKL-mRANK complex

X-ray diffraction
2.8Å resolution
PDB entry 5bnq coloured by chain, front view.
PDB entry 5bnq coloured by chain, side view.
PDB entry 5bnq coloured by chain, top view.
Source organisms:
Assembly composition:
hetero hexamer (preferred)
Entry contents: 2 distinct polypeptide molecules

Quick links

Assemblies

Assembly 1 (preferred)
Download    3D Visualisation
Assembly Name: Tumor necrosis factor receptor superfamily member 11A and Tumor necrosis factor ligand superfamily member 11, soluble form
hide full assembly name
Multimeric state: hetero hexamer
Accessible surface area: 43133.99 Å2
Buried surface area: 20830.48 Å2
Dissociation area: 96.49 Å2
Dissociation energy (ΔGdiss): 12.47 kcal/mol
Dissociation entropy (TΔSdiss): -0.82 kcal/mol
Symmetry number: 3
PDBe Complex ID: PDB-CPX-127142

Macromolecules

Tumor necrosis factor ligand superfamily member 11, soluble form
Chain: A
Length: 160 amino acids
Theoretical weight: 18.05 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O14788 (Residues: 158-317; Coverage: 51%)
Gene names: OPGL, RANKL, TNFSF11, TRANCE
Pfam: TNF(Tumour Necrosis Factor) family
InterPro:
CATH: Jelly Rolls
Tumor necrosis factor ligand superfamily member 11, soluble form in PDB entry 5bnq, assembly 1, front view.
Tumor necrosis factor ligand superfamily member 11, soluble form in PDB entry 5bnq, assembly 1, side view.
Tumor necrosis factor ligand superfamily member 11, soluble form in PDB entry 5bnq, assembly 1, top view.
Molecule details ›

Search similar proteins

Tumor necrosis factor receptor superfamily member 11A
Chain: R
Length: 216 amino acids
Theoretical weight: 24.02 KDa
Source organism: Mus musculus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: O35305 (Residues: 26-210; Coverage: 30%)
Gene names: Rank, Tnfrsf11a
Pfam:
InterPro:
CATH: Tumor Necrosis Factor Receptor, subunit A, domain 2
Tumor necrosis factor receptor superfamily member 11A in PDB entry 5bnq, assembly 1, front view.
Tumor necrosis factor receptor superfamily member 11A in PDB entry 5bnq, assembly 1, side view.
Tumor necrosis factor receptor superfamily member 11A in PDB entry 5bnq, assembly 1, top view.
Molecule details ›

Search similar proteins

Quick links