Function and Biology

BamACDE complex, outer membrane beta-barrel assembly machinery (BAM) complex

Source organism: Escherichia coli
Biochemical function: not assigned
Biological process: membrane assembly
Cellular component: outer membrane

GO terms

Biochemical function:
  • not assigned
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF07244
Domain description: Surface antigen variable number repeat
Occurring in:
  1. Outer membrane protein assembly factor BamA
The deposited structure of PDB entry 5d0q contains 8 copies of Pfam domain PF07244 (Surface antigen variable number repeat) in Outer membrane protein assembly factor BamA. Showing 4 copies in chain A.

PF04355
Domain description: SmpA / OmlA family
Occurring in:
  1. Outer membrane protein assembly factor BamE
The deposited structure of PDB entry 5d0q contains 2 copies of Pfam domain PF04355 (SmpA / OmlA family) in Outer membrane protein assembly factor BamE. Showing 1 copy in chain D [auth E].

PF13525
Domain description: Outer membrane lipoprotein
Occurring in:
  1. Outer membrane protein assembly factor BamD
The deposited structure of PDB entry 5d0q contains 2 copies of Pfam domain PF13525 (Outer membrane lipoprotein) in Outer membrane protein assembly factor BamD. Showing 1 copy in chain C [auth D].

PF06804
Domain description: NlpB/DapX lipoprotein
Occurring in:
  1. Outer membrane protein assembly factor BamC
The deposited structure of PDB entry 5d0q contains 2 copies of Pfam domain PF06804 (NlpB/DapX lipoprotein) in Outer membrane protein assembly factor BamC. Showing 1 copy in chain B [auth C].

PF01103
Domain description: Omp85 superfamily domain
Occurring in:
  1. Outer membrane protein assembly factor BamA
The deposited structure of PDB entry 5d0q contains 2 copies of Pfam domain PF01103 (Omp85 superfamily domain) in Outer membrane protein assembly factor BamA. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR034746
Domain description: POTRA domain
Occurring in:
  1. Outer membrane protein assembly factor BamA
IPR010827
Domain description: POTRA domain, BamA/TamA-like
Occurring in:
  1. Outer membrane protein assembly factor BamA
IPR017689
Domain description: Outer membrane protein assembly factor BamD
Occurring in:
  1. Outer membrane protein assembly factor BamD
IPR023707
Domain description: Outer membrane protein assembly factor BamA
Occurring in:
  1. Outer membrane protein assembly factor BamA
IPR026592
Domain description: Outer membrane protein assembly factor BamE
Occurring in:
  1. Outer membrane protein assembly factor BamE
IPR011990
Domain description: Tetratricopeptide-like helical domain superfamily
Occurring in:
  1. Outer membrane protein assembly factor BamD
IPR007450
Domain description: Outer membrane protein assembly factor BamE domain
Occurring in:
  1. Outer membrane protein assembly factor BamE
IPR037873
Domain description: BamE-like
Occurring in:
  1. Outer membrane protein assembly factor BamE
IPR039565
Domain description: Outer membrane lipoprotein BamD-like
Occurring in:
  1. Outer membrane protein assembly factor BamD
IPR042268
Domain description: Outer membrane protein assembly factor BamC, C-terminal
Occurring in:
  1. Outer membrane protein assembly factor BamC
IPR010653
Domain description: NlpB/DapX lipoprotein
Occurring in:
  1. Outer membrane protein assembly factor BamC
IPR014524
Domain description: Outer membrane protein assembly factor BamC
Occurring in:
  1. Outer membrane protein assembly factor BamC
IPR000184
Domain description: Bacterial surface antigen (D15)
Occurring in:
  1. Outer membrane protein assembly factor BamA
IPR039910
Domain description: Surface antigen D15-like
Occurring in:
  1. Outer membrane protein assembly factor BamA

Structure domains

CATH CATH domains
3.30.1450.10
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Beta-lactamase Inhibitory Protein; Chain:B, domain 1
Homology: Beta-lactamase Inhibitory Protein; Chain:B, domain 1
Occurring in:
  1. Outer membrane protein assembly factor BamE
The deposited structure of PDB entry 5d0q contains 2 copies of CATH domain 3.30.1450.10 (Beta-lactamase Inhibitory Protein; Chain:B, domain 1) in Outer membrane protein assembly factor BamE. Showing 1 copy in chain D [auth E].
1.25.40.10
Class: Mainly Alpha
Architecture: Alpha Horseshoe
Topology: Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
Homology: Tetratricopeptide repeat domain
Occurring in:
  1. Outer membrane protein assembly factor BamD
The deposited structure of PDB entry 5d0q contains 2 copies of CATH domain 1.25.40.10 (Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat) in Outer membrane protein assembly factor BamD. Showing 1 copy in chain C [auth D].