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Protruding domain of GII.17 norovirus Kawasaki323

X-ray diffraction
2.27Å resolution
PDB entry 5f4m coloured by chain, front view.
PDB entry 5f4m coloured by chain, side view.
PDB entry 5f4m coloured by chain, top view.
Source organism: Norovirus 13-BH-1/2013/GII.17
Assembly composition:
homo dimer (preferred)
Entry contents: 1 distinct polypeptide molecule

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Assemblies

Assembly 1 (preferred)
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Assembly Name: Capsid protein
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Multimeric state: homo dimer
Accessible surface area: 24163.24 Å2
Buried surface area: 3894.02 Å2
Dissociation area: 1,924.15 Å2
Dissociation energy (ΔGdiss): 4.27 kcal/mol
Dissociation entropy (TΔSdiss): 13.97 kcal/mol
Symmetry number: 2
PDBe Complex ID: PDB-CPX-492906

Macromolecules

Capsid protein
Chains: A, B
Length: 308 amino acids
Theoretical weight: 34.09 KDa
Source organism: Norovirus 13-BH-1/2013/GII.17
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: A0A0A7CJV4 (Residues: 225-528; Coverage: 57%)
Pfam: Calicivirus coat protein C-terminal
InterPro: Calicivirus coat protein C-terminal
CATH:
Capsid protein in PDB entry 5f4m, assembly 1, front view.
Capsid protein in PDB entry 5f4m, assembly 1, side view.
Capsid protein in PDB entry 5f4m, assembly 1, top view.
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