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The LPS Transporter LptDE from Yersinia pestis, core complex

Source organism: Yersinia pestis
Biochemical function: lipopolysaccharide binding
Biological process: Gram-negative-bacterium-type cell outer membrane assembly
Cellular component: outer membrane

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GO terms

Sequence families

Pfam Protein families (Pfam)
PF04390
Domain description: Lipopolysaccharide-assembly
Occurring in:
  1. LPS-assembly lipoprotein LptE
The deposited structure of PDB entry 5ixm contains 4 copies of Pfam domain PF04390 (Lipopolysaccharide-assembly) in LPS-assembly lipoprotein LptE. Showing 1 copy in chain H.

PF04453
Domain description: LPS transport system D
Occurring in:
  1. LPS-assembly protein LptD
The deposited structure of PDB entry 5ixm contains 4 copies of Pfam domain PF04453 (LPS transport system D) in LPS-assembly protein LptD. Showing 1 copy in chain A.

InterPro InterPro annotations
IPR007485
Domain description: LPS-assembly lipoprotein LptE
Occurring in:
  1. LPS-assembly lipoprotein LptE
IPR007543
Domain description: LptD, C-terminal
Occurring in:
  1. LPS-assembly protein LptD

Structure domain

CATH CATH domain
3.30.160.150
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Double Stranded RNA Binding Domain
Homology: Lipoprotein like domain
Occurring in:
  1. LPS-assembly lipoprotein LptE
The deposited structure of PDB entry 5ixm contains 4 copies of CATH domain 3.30.160.150 (Double Stranded RNA Binding Domain) in LPS-assembly lipoprotein LptE. Showing 1 copy in chain H.

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