Articles - 5ka3 mentioned but not cited (2)
- Conformational Rigidity and Protein Dynamics at Distinct Timescales Regulate PTP1B Activity and Allostery. Choy MS, Li Y, Machado LESF, Kunze MBA, Connors CR, Wei X, Lindorff-Larsen K, Page R, Peti W. Mol Cell 65 644-658.e5 (2017)
- research-article Native dynamics and allosteric responses in PTP1B probed by high-resolution HDX-MS. Woods VA, Abzalimov RR, Keedy DA. bioRxiv 2023.07.12.548582 (2023)
Reviews citing this publication (6)
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- Spotlight on the Ballet of Proteins: The Structural Dynamic Properties of Proteins Illuminated by Solution NMR. Tokunaga Y, Viennet T, Arthanari H, Takeuchi K. Int J Mol Sci 21 E1829 (2020)
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- The influence of random-coil chemical shifts on the assessment of structural propensities in folded proteins and IDPs. Kovács D, Bodor A. RSC Adv 13 10182-10203 (2023)
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- Cooperative dynamics across distinct structural elements regulate PTP1B activity. Torgeson KR, Clarkson MW, Kumar GS, Page R, Peti W. J Biol Chem 295 13829-13837 (2020)
- The mode of action of the Protein tyrosine phosphatase 1B inhibitor Ertiprotafib. Kumar GS, Page R, Peti W. PLoS One 15 e0240044 (2020)
- Regulation of the Human Phosphatase PTPN4 by the inter-domain linker connecting the PDZ and the phosphatase domains. Caillet-Saguy C, Toto A, Guerois R, Maisonneuve P, di Silvio E, Sawyer K, Gianni S, Wolff N. Sci Rep 7 7875 (2017)
- The catalytic activity of TCPTP is auto-regulated by its intrinsically disordered tail and activated by Integrin alpha-1. Singh JP, Li Y, Chen YY, Hsu SD, Page R, Peti W, Meng TC. Nat Commun 13 94 (2022)
- A single amino acid substitution uncouples catalysis and allostery in an essential biosynthetic enzyme in Mycobacterium tuberculosis. Jiao W, Fan Y, Blackmore NJ, Parker EJ. J Biol Chem 295 6252-6262 (2020)
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- RPTPα phosphatase activity is allosterically regulated by the membrane-distal catalytic domain. Wen Y, Yang S, Wakabayashi K, Svensson MND, Stanford SM, Santelli E, Bottini N. J Biol Chem 295 4923-4936 (2020)
- Abietane-Type Diterpenoids Inhibit Protein Tyrosine Phosphatases by Stabilizing an Inactive Enzyme Conformation. Hjortness MK, Riccardi L, Hongdusit A, Ruppe S, Zhao M, Kim EY, Zwart PH, Sankaran B, Arthanari H, Sousa MC, De Vivo M, Fox JM. Biochemistry 57 5886-5896 (2018)
- Insights into the importance of WPD-loop sequence for activity and structure in protein tyrosine phosphatases. Shen R, Crean RM, Olsen KJ, Corbella M, Calixto AR, Richan T, Brandão TAS, Berry RD, Tolman A, Loria JP, Johnson SJ, Kamerlin SCL, Hengge AC. Chem Sci 13 13524-13540 (2022)
- Mechanistic roles of tyrosine phosphorylation in reversible amyloids, autoinhibition, and endosomal membrane association of ALIX. Elias RD, Ramaraju B, Deshmukh L. J Biol Chem 297 101328 (2021)
- Room-temperature crystallography reveals altered binding of small-molecule fragments to PTP1B. Skaist Mehlman T, Biel JT, Azeem SM, Nelson ER, Hossain S, Dunnett L, Paterson NG, Douangamath A, Talon R, Axford D, Orins H, von Delft F, Keedy DA. Elife 12 e84632 (2023)
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- Biochemical, Enzymatic, and Computational Characterization of Recurrent Somatic Mutations of the Human Protein Tyrosine Phosphatase PTP1B in Primary Mediastinal B Cell Lymphoma. Liu R, Sun Y, Berthelet J, Bui LC, Xu X, Viguier M, Dupret JM, Deshayes F, Rodrigues Lima F. Int J Mol Sci 23 7060 (2022)
- Computational Insight into Protein Tyrosine Phosphatase 1B Inhibition: A Case Study of the Combined Ligand- and Structure-Based Approach. Zhang X, Jiang H, Li W, Wang J, Cheng M. Comput Math Methods Med 2017 4245613 (2017)
- Reviving B-Factors: Activating ALK Mutations Increase Protein Dynamics of the Unphosphorylated Kinase. Johnson TW, Bolanos B, Brooun A, Gallego RA, Gehlhaar D, Jalaie M, McTigue M, Timofeevski S. ACS Med Chem Lett 9 872-877 (2018)
- Room-temperature serial synchrotron crystallography of the human phosphatase PTP1B. Sharma S, Ebrahim A, Keedy DA. Acta Crystallogr F Struct Biol Commun 79 23-30 (2023)
- Structural analysis of protein tyrosine phosphatase 1B reveals potentially druggable allosteric binding sites. Kumar AP, Nguyen MN, Verma C, Lukman S. Proteins 86 301-321 (2018)
- Letter Discovery and Validation of the Binding Poses of Allosteric Fragment Hits to Protein Tyrosine Phosphatase 1b: From Molecular Dynamics Simulations to X-ray Crystallography. Greisman JB, Willmore L, Yeh CY, Giordanetto F, Shahamadtar S, Nisonoff H, Maragakis P, Shaw DE. J Chem Inf Model 63 2644-2650 (2023)
- Frustration-guided motion planning reveals conformational transitions in proteins. Budday D, Fonseca R, Leyendecker S, van den Bedem H. Proteins 85 1795-1807 (2017)
- AQcalc: A web server that identifies weak molecular interactions in protein structures. Afshinpour M, Smith LA, Chakravarty S. Protein Sci 32 e4762 (2023)
- Direct Intracellular Delivery of Benzene Diazonium Ions As Observed by Increased Tyrosine Phosphorylation. Cornejo NR, Amofah B, Lipinski A, Langlais PR, Ghosh I, Jewett JC. Biochemistry 61 656-664 (2022)
- Kinetic characterization of the inhibition of protein tyrosine phosphatase-1B by Vanadyl (VO2+) chelates. Hon J, Hwang MS, Charnetzki MA, Rashed IJ, Brady PB, Quillin S, Makinen MW. J Biol Inorg Chem 22 1267-1279 (2017)
- 1H, 15N and 13C sequence specific backbone assignment of the vanadate inhibited hematopoietic tyrosine phosphatase. Machado LESF, Page R, Peti W. Biomol NMR Assign 12 5-9 (2018)
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- An Isoform-Selective PTP1B Inhibitor Derived from Nitrogen-Atom Augmentation of Radicicol. Shi T, Wijeratne EMK, Solano C, Ambrose AJ, Ross AB, Norwood C, Orido CK, Grigoryan T, Tillotson J, Kang M, Luo G, Keegan BM, Hu W, Hu W, Blagg BSJ, Zhang DD, Gunatilaka AAL, Chapman E. Biochemistry 58 3225-3231 (2019)
- Assessment of Flexible Shape Complementarity: New Opportunities to Explain and Induce Selectivity in Ligands of Protein Tyrosine Phosphatase 1B. Naß A, Schaller D, Wolber G. Mol Inform 38 e1800141 (2019)
- Biophysical Rationale for the Selective Inhibition of PTP1B over TCPTP by Nonpolar Terpenoids. Friedman AJ, Padgette HM, Kramer L, Liechty ET, Donovan GW, Fox JM, Shirts MR. J Phys Chem B 127 8305-8316 (2023)
- Deconstructing allostery by computational assessment of the binding determinants of allosteric PTP1B modulators. Hardie A, Cossins BP, Lovera S, Michel J. Commun Chem 6 125 (2023)
- Dynamic Long-Range Interactions Influence Substrate Binding and Catalysis by Human Histidine Triad Nucleotide-Binding Proteins (HINTs), Key Regulators of Multiple Cellular Processes and Activators of Antiviral ProTides. Strom A, Shah R, Dolot R, Rogers MS, Tong CL, Wang D, Xia Y, Lipscomb JD, Wagner CR. Biochemistry 61 2648-2661 (2022)
- Macromolecular crowding amplifies allosteric regulation of T-cell protein tyrosine phosphatase. Tun MT, Yang S, Forti FL, Santelli E, Bottini N. J Biol Chem 298 102655 (2022)
- Mapping the Chemical Space of Active-Site Targeted Covalent Ligands for Protein Tyrosine Phosphatases. Hong SH, Xi SY, Johns AC, Tang LC, Li A, Hum MN, Chartier CA, Jovanovic M, Shah NH. Chembiochem 24 e202200706 (2023)
- Protein Conformational Space at the Edge of Allostery: Turning a Nonallosteric Malate Dehydrogenase into an "Allosterized" Enzyme Using Evolution-Guided Punctual Mutations. Iorio A, Brochier-Armanet C, Mas C, Sterpone F, Madern D. Mol Biol Evol 39 msac186 (2022)
- Reversible phase separation of ESCRT protein ALIX through tyrosine phosphorylation. Elias RD, Zhu Y, Su Q, Ghirlando R, Zhang J, Deshmukh L. Sci Adv 9 eadg3913 (2023)