5mdz Citations

Translational termination without a stop codon.

Science 354 1437-1440 (2016)
Related entries: 5mdv, 5mdw, 5mdy

Cited: 51 times
EuropePMC logo PMID: 27934701

Abstract

Ribosomes stall when they encounter the end of messenger RNA (mRNA) without an in-frame stop codon. In bacteria, these "nonstop" complexes can be rescued by alternative ribosome-rescue factor A (ArfA). We used electron cryomicroscopy to determine structures of ArfA bound to the ribosome with 3'-truncated mRNA, at resolutions ranging from 3.0 to 3.4 angstroms. ArfA binds within the ribosomal mRNA channel and substitutes for the absent stop codon in the A site by specifically recruiting release factor 2 (RF2), initially in a compact preaccommodated state. A similar conformation of RF2 may occur on stop codons, suggesting a general mechanism for release-factor-mediated translational termination in which a conformational switch leads to peptide release only when the appropriate signal is present in the A site.

Reviews - 5mdz mentioned but not cited (3)

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Articles - 5mdz mentioned but not cited (13)

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Reviews citing this publication (7)

  1. Quality controls induced by aberrant translation. Inada T. Nucleic Acids Res 48 1084-1096 (2020)
  2. Structural Basis for Ribosome Rescue in Bacteria. Huter P, Müller C, Arenz S, Beckert B, Wilson DN. Trends Biochem Sci 42 669-680 (2017)
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Articles citing this publication (28)

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  14. trans-Translation inhibitors bind to a novel site on the ribosome and clear Neisseria gonorrhoeae in vivo. Aron ZD, Mehrani A, Hoffer ED, Connolly KL, Srinivas P, Torhan MC, Alumasa JN, Cabrera M, Hosangadi D, Barbor JS, Cardinale SC, Kwasny SM, Morin LR, Butler MM, Opperman TJ, Bowlin TL, Jerse A, Stagg SM, Dunham CM, Keiler KC. Nat Commun 12 1799 (2021)
  15. Structures of tmRNA and SmpB as they transit through the ribosome. Guyomar C, D'Urso G, Chat S, Giudice E, Gillet R. Nat Commun 12 4909 (2021)
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  17. Conformation of methylated GGQ in the Peptidyl Transferase Center during Translation Termination. Zeng F, Jin H. Sci Rep 8 2349 (2018)
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