GO terms
Biochemical function:
Biological process:
Cellular component:
Sequence families
Protein families (Pfam)
PF00861
Domain description:
Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
Occurring in:
Occurring in:
![The deposited structure of PDB entry <span class='highlight'>5nrg</span> contains 1 copy of Pfam domain <span class='highlight'>PF00861 (Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast)</span> in <span class='highlight'>Large ribosomal subunit protein uL18</span>. Showing 1 copy in chain <span class='highlight'>M [auth L]</span>. The deposited structure of PDB entry 5nrg contains 1 copy of Pfam domain PF00861 (Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast) in Large ribosomal subunit protein uL18. Showing 1 copy in chain M [auth L].](https://www.ebi.ac.uk/pdbe/static/entry/5nrg_13_L_Pfam_PF00861_image-200x200.png)
RNA families (Rfam)
InterPro annotations
IPR036789
Domain description:
Large ribosomal subunit protein uL6-like, alpha-beta domain superfamily
Occurring in:
Occurring in:
IPR019927
Domain description:
Large ribosomal subunit protein uL3, bacterial/organelle-type
Occurring in:
Occurring in:
IPR036919
Domain description:
Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamily
Occurring in:
Occurring in:
IPR005727
Domain description:
Large ribosomal subunit protein uL22, bacterial/chloroplast-type
Occurring in:
Occurring in:
IPR005880
Domain description:
Large ribosomal subunit protein uL2, bacterial/organellar-type
Occurring in:
Occurring in:
IPR016082
Domain description:
Large ribosomal subunit protein uL30-like, ferredoxin-like fold domain
Occurring in:
Occurring in:
IPR011035
Domain description:
Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamily
Occurring in:
Occurring in:
IPR020056
Domain description:
Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminal
Occurring in:
Occurring in:
IPR012678
Domain description:
Ribosomal protein uL23/eL15/eS24 core domain superfamily
Occurring in:
Occurring in:
IPR047867
Domain description:
Large ribosomal subunit protein uL22, bacterial/organelle-type
Occurring in:
Occurring in:
Structure domains
CATH domains
3.30.1390.20
Class:
Alpha Beta
Architecture:
2-Layer Sandwich
Topology:
Ribosomal Protein L30; Chain: A,
Homology:
Ribosomal protein L30, ferredoxin-like fold domain
Occurring in:
![The deposited structure of PDB entry <span class='highlight'>5nrg</span> contains 1 copy of CATH domain <span class='highlight'>3.30.1390.20 (Ribosomal Protein L30; Chain: A,)</span> in <span class='highlight'>Large ribosomal subunit protein uL30</span>. Showing 1 copy in chain <span class='highlight'>W</span>. The deposited structure of PDB entry 5nrg contains 1 copy of CATH domain 3.30.1390.20 (Ribosomal Protein L30; Chain: A,) in Large ribosomal subunit protein uL30. Showing 1 copy in chain W.](https://www.ebi.ac.uk/pdbe/static/entry/5nrg_23_W_CATH_3.30.1390.20_image-200x200.png)
2.170.120.20
Class:
Mainly Beta
Architecture:
Beta Complex
Topology:
RNA Polymerase Alpha Subunit; Chain A, domain 2
Homology:
Ribosomal protein L25, beta domain
Occurring in:
![The deposited structure of PDB entry <span class='highlight'>5nrg</span> contains 1 copy of CATH domain <span class='highlight'>2.170.120.20 (RNA Polymerase Alpha Subunit; Chain A, domain 2)</span> in <span class='highlight'>Large ribosomal subunit protein bL25</span>. Showing 1 copy in chain <span class='highlight'>T [auth S]</span>. The deposited structure of PDB entry 5nrg contains 1 copy of CATH domain 2.170.120.20 (RNA Polymerase Alpha Subunit; Chain A, domain 2) in Large ribosomal subunit protein bL25. Showing 1 copy in chain T [auth S].](https://www.ebi.ac.uk/pdbe/static/entry/5nrg_20_S_CATH_2.170.120.20_image-200x200.png)
2.40.240.10
Class:
Mainly Beta
Architecture:
Beta Barrel
Topology:
Ribosomal Protein L25; Chain P
Homology:
Ribosomal Protein L25; Chain P
Occurring in:
![The deposited structure of PDB entry <span class='highlight'>5nrg</span> contains 1 copy of CATH domain <span class='highlight'>2.40.240.10 (Ribosomal Protein L25; Chain P)</span> in <span class='highlight'>Large ribosomal subunit protein bL25</span>. Showing 1 copy in chain <span class='highlight'>T [auth S]</span>. The deposited structure of PDB entry 5nrg contains 1 copy of CATH domain 2.40.240.10 (Ribosomal Protein L25; Chain P) in Large ribosomal subunit protein bL25. Showing 1 copy in chain T [auth S].](https://www.ebi.ac.uk/pdbe/static/entry/5nrg_20_S_CATH_2.40.240.10_image-200x200.png)
3.30.70.330
Class:
Alpha Beta
Architecture:
2-Layer Sandwich
Topology:
Alpha-Beta Plaits
Homology:
Alpha-Beta Plaits
Occurring in:
![The deposited structure of PDB entry <span class='highlight'>5nrg</span> contains 1 copy of CATH domain <span class='highlight'>3.30.70.330 (Alpha-Beta Plaits)</span> in <span class='highlight'>Large ribosomal subunit protein uL23</span>. Showing 1 copy in chain <span class='highlight'>R [auth Q]</span>. The deposited structure of PDB entry 5nrg contains 1 copy of CATH domain 3.30.70.330 (Alpha-Beta Plaits) in Large ribosomal subunit protein uL23. Showing 1 copy in chain R [auth Q].](https://www.ebi.ac.uk/pdbe/static/entry/5nrg_18_Q_CATH_3.30.70.330_image-200x200.png)
3.90.470.10
Class:
Alpha Beta
Architecture:
Alpha-Beta Complex
Topology:
Ribosomal Protein L22; Chain A
Homology:
Ribosomal protein L22/L17
Occurring in:
![The deposited structure of PDB entry <span class='highlight'>5nrg</span> contains 1 copy of CATH domain <span class='highlight'>3.90.470.10 (Ribosomal Protein L22; Chain A)</span> in <span class='highlight'>Large ribosomal subunit protein uL22</span>. Showing 1 copy in chain <span class='highlight'>Q [auth P]</span>. The deposited structure of PDB entry 5nrg contains 1 copy of CATH domain 3.90.470.10 (Ribosomal Protein L22; Chain A) in Large ribosomal subunit protein uL22. Showing 1 copy in chain Q [auth P].](https://www.ebi.ac.uk/pdbe/static/entry/5nrg_17_P_CATH_3.90.470.10_image-200x200.png)
3.30.420.100
Class:
Alpha Beta
Architecture:
2-Layer Sandwich
Topology:
Nucleotidyltransferase; domain 5
Homology:
Nucleotidyltransferase; domain 5
Occurring in:
![The deposited structure of PDB entry <span class='highlight'>5nrg</span> contains 1 copy of CATH domain <span class='highlight'>3.30.420.100 (Nucleotidyltransferase; domain 5)</span> in <span class='highlight'>Large ribosomal subunit protein uL18</span>. Showing 1 copy in chain <span class='highlight'>M [auth L]</span>. The deposited structure of PDB entry 5nrg contains 1 copy of CATH domain 3.30.420.100 (Nucleotidyltransferase; domain 5) in Large ribosomal subunit protein uL18. Showing 1 copy in chain M [auth L].](https://www.ebi.ac.uk/pdbe/static/entry/5nrg_13_L_CATH_3.30.420.100_image-200x200.png)
3.90.1030.10
Class:
Alpha Beta
Architecture:
Alpha-Beta Complex
Topology:
50s Ribosomal Protein L17; Chain: A,
Homology:
Ribosomal protein L17
Occurring in:
![The deposited structure of PDB entry <span class='highlight'>5nrg</span> contains 1 copy of CATH domain <span class='highlight'>3.90.1030.10 (50s Ribosomal Protein L17; Chain: A,)</span> in <span class='highlight'>Large ribosomal subunit protein bL17</span>. Showing 1 copy in chain <span class='highlight'>L [auth K]</span>. The deposited structure of PDB entry 5nrg contains 1 copy of CATH domain 3.90.1030.10 (50s Ribosomal Protein L17; Chain: A,) in Large ribosomal subunit protein bL17. Showing 1 copy in chain L [auth K].](https://www.ebi.ac.uk/pdbe/static/entry/5nrg_12_K_CATH_3.90.1030.10_image-200x200.png)
3.90.1170.10
Class:
Alpha Beta
Architecture:
Alpha-Beta Complex
Topology:
Aldehyde Oxidoreductase; domain 3
Homology:
Ribosomal protein L10e/L16
Occurring in:
![The deposited structure of PDB entry <span class='highlight'>5nrg</span> contains 1 copy of CATH domain <span class='highlight'>3.90.1170.10 (Aldehyde Oxidoreductase; domain 3)</span> in <span class='highlight'>Large ribosomal subunit protein uL16</span>. Showing 1 copy in chain <span class='highlight'>K [auth J]</span>. The deposited structure of PDB entry 5nrg contains 1 copy of CATH domain 3.90.1170.10 (Aldehyde Oxidoreductase; domain 3) in Large ribosomal subunit protein uL16. Showing 1 copy in chain K [auth J].](https://www.ebi.ac.uk/pdbe/static/entry/5nrg_11_J_CATH_3.90.1170.10_image-200x200.png)
2.40.150.20
Class:
Mainly Beta
Architecture:
Beta Barrel
Topology:
Ribosomal Protein L14
Homology:
Ribosomal protein L14
Occurring in:
![The deposited structure of PDB entry <span class='highlight'>5nrg</span> contains 1 copy of CATH domain <span class='highlight'>2.40.150.20 (Ribosomal Protein L14)</span> in <span class='highlight'>Large ribosomal subunit protein uL14</span>. Showing 1 copy in chain <span class='highlight'>I [auth H]</span>. The deposited structure of PDB entry 5nrg contains 1 copy of CATH domain 2.40.150.20 (Ribosomal Protein L14) in Large ribosomal subunit protein uL14. Showing 1 copy in chain I [auth H].](https://www.ebi.ac.uk/pdbe/static/entry/5nrg_9_H_CATH_2.40.150.20_image-200x200.png)