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Rhamnogalacturonan lyase

Source organism: Bacteroides thetaiotaomicron
Biochemical function: metal ion binding
Biological process: not assigned
Cellular component: extracellular region

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EC 3.2.1.n1: Blood group B branched chain alpha-1,3-galactosidase

Reaction catalysed:
Hydrolysis of terminal, non-reducing branched (1->3)-alpha-D-galactosidic residues, producing free D-galactose
Systematic name:
(1->3)-alpha-D-galactose-branched-(blood group B structures) 3-galactohydrolase

EC 3.2.1.22: Alpha-galactosidase

Reaction catalysed:
Hydrolysis of terminal, non-reducing alpha-D-galactose residues in alpha-D-galactosides, including galactose oligosaccharides, galactomannans and galactolipids
Systematic name:
Alpha-D-galactoside galactohydrolase
Alternative Name(s):
  • Alpha-D-galactosidase
  • Alpha-galactosidase A
  • Alpha-galactoside galactohydrolase
  • Melibiase

GO terms

Sequence families

Pfam Protein families (Pfam)
PF16380
Domain description: Rhamnogalacturonan lyase BT_4170-like, C-terminal
Occurring in:
  1. Pectate lyase L
The deposited structure of PDB entry 5olr contains 3 copies of Pfam domain PF16380 (Domain of unknown function) in BT-4170-like C-terminal domain-containing protein. Showing 1 copy in chain C.

PF22842
Domain description: Pel9A-like, right handed beta helix region
Occurring in:
  1. Pectate lyase L

InterPro InterPro annotations
IPR032153
Domain description: BT_4170-like, C-terminal
Occurring in:
  1. Pectate lyase L
IPR011050
Domain description: Pectin lyase fold/virulence factor
Occurring in:
  1. Pectate lyase L
IPR012334
Domain description: Pectin lyase fold
Occurring in:
  1. Pectate lyase L

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