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PanDDA analysis group deposition -- Auto-refined data of Aar2/RNaseH for ground state model 23

X-ray diffraction
1.62Å resolution
PDB entry 5qz8 coloured by chain, front view.
PDB entry 5qz8 coloured by chain, side view.
PDB entry 5qz8 coloured by chain, top view.
Source organism: Saccharomyces cerevisiae S288C
Assembly composition:
hetero dimer (preferred)
Entry contents: 2 distinct polypeptide molecules

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Assemblies

Assembly 1 (preferred)
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Assembly Name: A1 cistron-splicing factor AAR2 and Pre-mRNA-splicing factor 8
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Multimeric state: hetero dimer
Accessible surface area: 26673.27 Å2
Buried surface area: 907.99 Å2
Dissociation area: 454 Å2
Dissociation energy (ΔGdiss): -3.48 kcal/mol
Dissociation entropy (TΔSdiss): 12.69 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-152275

Macromolecules

Pre-mRNA-splicing factor 8
Chain: A
Length: 258 amino acids
Theoretical weight: 29.5 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
  • Canonical: P33334 (Residues: 1836-2090; Coverage: 11%)
Gene names: DBF3, DNA39, PRP8, RNA8, SLT21, USA2, YHR165C
Pfam: PRP8 domain IV core
InterPro:
Pre-mRNA-splicing factor 8 in PDB entry 5qz8, assembly 1, front view.
Pre-mRNA-splicing factor 8 in PDB entry 5qz8, assembly 1, side view.
Pre-mRNA-splicing factor 8 in PDB entry 5qz8, assembly 1, top view.
Molecule details ›

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A1 cistron-splicing factor AAR2
Chain: B
Length: 308 amino acids
Theoretical weight: 36.21 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
  • Canonical: P32357 (Residues: 1-152, 171-317; Coverage: 84%)
Gene names: AAR2, YBL06.06, YBL0611, YBL074C
Pfam:
InterPro:
A1 cistron-splicing factor AAR2 in PDB entry 5qz8, assembly 1, front view.
A1 cistron-splicing factor AAR2 in PDB entry 5qz8, assembly 1, side view.
A1 cistron-splicing factor AAR2 in PDB entry 5qz8, assembly 1, top view.
Molecule details ›

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