Structure analysis

PanDDA analysis group deposition -- Aar2/RNaseH in complex with fragment F2X-Entry A07, DMSO-free

X-ray diffraction
1.7Å resolution
Assembly composition:
hetero dimer (preferred)
Entry contents: 2 distinct polypeptide molecules

Assemblies

Assembly 1 (preferred)
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Multimeric state: hetero dimer
Accessible surface area: 26587.83 Å2
Buried surface area: 885.7 Å2
Dissociation area: 442.85 Å2
Dissociation energy (ΔGdiss): -3.87 kcal/mol
Dissociation entropy (TΔSdiss): 12.69 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-152275

Macromolecules

Chain: A
Length: 258 amino acids
Theoretical weight: 29.5 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
  • Canonical: P33334 (Residues: 1836-2090; Coverage: 11%)
Gene names: DBF3, DNA39, PRP8, RNA8, SLT21, USA2, YHR165C
Pfam: PRP8 domain IV core
InterPro:
PDBe-KB: UniProt Coverage View: P33334  
125820406080100120140160180200220240
 
100200
UniProt
P33334
Chains
Domains
Secondary structure
Flexibility predictions
Interaction interfaces
Sequence conservation

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Chain: B
Length: 308 amino acids
Theoretical weight: 36.21 KDa
Source organism: Saccharomyces cerevisiae S288C
Expression system: Escherichia coli
UniProt:
  • Canonical: P32357 (Residues: 1-317; Coverage: 86%)
Gene names: AAR2, YBL06.06, YBL0611, YBL074C
Pfam:
InterPro:
PDBe-KB: UniProt Coverage View: P32357  
130820406080100120140160180200220240260280300
 
100200300
UniProt
P32357
Chains
Domains
Secondary structure
Flexibility predictions
Ligand binding sites
Interaction interfaces

Search similar proteins