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Caspase-3 Mutant- D9A,D28A,T152D

X-ray diffraction
1.87Å resolution
PDB entry 6bgk coloured by chain, front view.
PDB entry 6bgk coloured by chain, side view.
PDB entry 6bgk coloured by chain, top view.
Source organism: Homo sapiens
Assembly composition:
hetero trimer (preferred)
Entry contents: 3 distinct polypeptide molecules

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Assemblies

Assembly 1
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Assembly Name: Caspase-3 and peptide
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Multimeric state: hetero trimer
Accessible surface area: 11373.81 Å2
Buried surface area: 6128.23 Å2
Dissociation area: 599.73 Å2
Dissociation energy (ΔGdiss): 4.02 kcal/mol
Dissociation entropy (TΔSdiss): 5.57 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-154701
Assembly 2 (preferred)
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Assembly Name: Caspase-3 and peptide
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Multimeric state: hetero trimer
Accessible surface area: 11210.4 Å2
Buried surface area: 6483.67 Å2
Dissociation area: 594.3 Å2
Dissociation energy (ΔGdiss): 5.23 kcal/mol
Dissociation entropy (TΔSdiss): 5.58 kcal/mol
Symmetry number: 1
PDBe Complex ID: PDB-CPX-154701

Macromolecules

Caspase-3 subunit p17
Chains: A, B
Length: 175 amino acids
Theoretical weight: 19.69 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli K-12
UniProt:
  • Canonical: P42574 (Residues: 1-175; Coverage: 63%)
Gene names: CASP3, CPP32
Pfam: Caspase domain
InterPro:
CATH: Rossmann fold
Caspase-3 subunit p17 in PDB entry 6bgk, assembly 2, front view.
Caspase-3 subunit p17 in PDB entry 6bgk, assembly 2, side view.
Caspase-3 subunit p17 in PDB entry 6bgk, assembly 2, top view.
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Caspase-3 subunit p12
Chains: C, D
Length: 103 amino acids
Theoretical weight: 12.05 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli K-12
UniProt:
  • Canonical: P42574 (Residues: 176-277; Coverage: 37%)
Gene names: CASP3, CPP32
Pfam: Caspase domain
InterPro:
CATH: Caspase-like
Caspase-3 subunit p12 in PDB entry 6bgk, assembly 2, front view.
Caspase-3 subunit p12 in PDB entry 6bgk, assembly 2, side view.
Caspase-3 subunit p12 in PDB entry 6bgk, assembly 2, top view.
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ACE-ASP-GLU-VAL-ASP-0QE
Chains: F, H
Length: 6 amino acids
Theoretical weight: 535 Da
Source organism: Homo sapiens
Expression system: Not provided
ACE-ASP-GLU-VAL-ASP-0QE in PDB entry 6bgk, assembly 2, front view.
ACE-ASP-GLU-VAL-ASP-0QE in PDB entry 6bgk, assembly 2, side view.
ACE-ASP-GLU-VAL-ASP-0QE in PDB entry 6bgk, assembly 2, top view.
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