› 6fma

X-ray diffraction
1.67Å resolution

Crystal structure of ERK2 in complex with an adenosine derivative

Released:
DOI: 10.2210/pdb6fma/pdb
PDB entry 6fma coloured by chain, front view.
PDB entry 6fma coloured by chain, side view.
PDB entry 6fma coloured by chain, top view.
Source organism: Rattus norvegicus
Entry authors: Gelin M, Labesse G

Function and Biology Details

Reaction catalysed: 
ATP + a protein = ADP + a phosphoprotein
Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-158941 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Mitogen-activated protein kinase 1 Chain: A
Molecule details ›
Chain: A
Length: 364 amino acids
Theoretical weight: 42.24 KDa
Source organism: Rattus norvegicus
Expression system: Escherichia coli
UniProt:
  • Canonical: P63086 (Residues: 1-358; Coverage: 100%)
Gene names: Erk2, Mapk, Mapk1, Prkm1
Sequence domains: Protein kinase domain
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand DMS 4 x DMS
Ligand SO4 1 x SO4
Ligand DU8 1 x DU8
1 modified residue:
Ligand CME 1 x CME

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID14-4
Spacegroup: P21
Unit cell:
a: 48.66Å b: 70.04Å c: 59.64Å
α: 90° β: 108.62° γ: 90°
R-values:
R R work R free
0.146 0.143 0.186
Expression system: Escherichia coli

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