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Single particle reconstruction of the symmetric core an engineered protein scaffold

Source organisms:
Biochemical function: 5-carboxymethyl-2-hydroxymuconate delta-isomerase activity
Biological process: catabolic process
Cellular component: not assigned

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GO terms

Biochemical function:
Biological process:
Cellular component:
  • not assigned

Sequence family

Pfam Protein family (Pfam)
PF02962
Domain description: 5-carboxymethyl-2-hydroxymuconate isomerase
Occurring in:
  1. 5-carboxymethyl-2-hydroxymuconate isomerase
The deposited structure of PDB entry 6nht contains 12 copies of Pfam domain PF02962 (5-carboxymethyl-2-hydroxymuconate isomerase) in 5-carboxymethyl-2-hydroxymuconate isomerase. Showing 1 copy in chain E.

InterPro InterPro annotations
IPR002110
Domain description: Ankyrin repeat
Occurring in:
  1. DARP14 - Subunit A with DARPin
IPR004220
Domain description: 5-carboxymethyl-2-hydroxymuconate isomerase
Occurring in:
  1. 5-carboxymethyl-2-hydroxymuconate isomerase
IPR036770
Domain description: Ankyrin repeat-containing domain superfamily
Occurring in:
  1. DARP14 - Subunit A with DARPin
IPR014347
Domain description: Tautomerase/MIF superfamily
Occurring in:
  1. 5-carboxymethyl-2-hydroxymuconate isomerase
IPR036451
Domain description: Cobalamin adenosyltransferase-like superfamily
Occurring in:
  1. DARP14 - Subunit A with DARPin
IPR029499
Domain description: Corrinoid adenosyltransferase, PduO-type
Occurring in:
  1. DARP14 - Subunit A with DARPin
IPR016030
Domain description: Cobalamin adenosyltransferase-like
Occurring in:
  1. DARP14 - Subunit A with DARPin

Structure domain

CATH CATH domain
3.30.429.10
Class: Alpha Beta
Architecture: 2-Layer Sandwich
Topology: Macrophage Migration Inhibitory Factor
Homology: Macrophage Migration Inhibitory Factor
Occurring in:
  1. 5-carboxymethyl-2-hydroxymuconate isomerase
The deposited structure of PDB entry 6nht contains 12 copies of CATH domain 3.30.429.10 (Macrophage Migration Inhibitory Factor) in 5-carboxymethyl-2-hydroxymuconate isomerase. Showing 1 copy in chain E.

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