6pfv

X-ray diffraction
3Å resolution

Structure of S. venezuelae RisG-WhiG-c-di-GMP complex: orthorhombic crystal form

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-104899 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
AmfC protein Chains: B, E, T
Molecule details ›
Chains: B, E, T
Length: 176 amino acids
Theoretical weight: 19.99 KDa
Source organism: Streptomyces venezuelae ATCC 10712
Expression system: Escherichia coli
UniProt:
  • Canonical: F2RFR7 (Residues: 26-199; Coverage: 87%)
Gene name: SVEN_3933
Sequence domains: RsiG-like
RNA polymerase sigma factor Chains: A, D, G
Molecule details ›
Chains: A, D, G
Length: 278 amino acids
Theoretical weight: 30.81 KDa
Source organism: Streptomyces sp. PanSC19
Expression system: Escherichia coli
UniProt:
  • Canonical: A0A3N1Q704 (Residues: 1-278; Coverage: 100%)
Gene name: EDD98_3685
Sequence domains:

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.3.1
Unit cell:
a: 79.847Å b: 97.339Å c: 204.58Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.218 0.214 0.278
Expression system: Escherichia coli